ECODEvolutionary Classification of Protein Domains

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PDB 3PDE

X-RAY DIFFRACTION1.75 Å4 chains4 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AFarnesyl-diphosphate synthaseview chain

1 domain

e3pdeA1(A:3-300)

Chain BFarnesyl-diphosphate synthaseview chain

1 domain

e3pdeB1(B:3-298)

Chain CFarnesyl-diphosphate synthaseview chain

1 domain

e3pdeC1(C:3-298)

Chain DFarnesyl-diphosphate synthaseview chain

1 domain

e3pdeD1(D:3-300)

All Domains (4)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3pdeA1	A:3-300	polyprenyl_synt	141 → 141.1 → 141.1.1
2	B	e3pdeB1	B:3-298	polyprenyl_synt	141 → 141.1 → 141.1.1
3	C	e3pdeC1	C:3-298	polyprenyl_synt	141 → 141.1 → 141.1.1
4	D	e3pdeD1	D:3-300	polyprenyl_synt	141 → 141.1 → 141.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors