ECODEvolutionary Classification of Protein Domains

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PDB 3PTF

X-RAY DIFFRACTION2.70 Å4 chains4 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AUbiquitin-conjugating enzyme E2 D1view chain

1 domain

e3ptfA2(A:2-147)

Chain BUbiquitin-conjugating enzyme E2 D1view chain

1 domain

e3ptfB1(B:1-147)

Chain CPolyubiquitin-Bview chain

1 domain

e3ptfC1(C:1-73)

Chain DPolyubiquitin-Bview chain

1 domain

e3ptfD1(D:0-73)

All Domains (4)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3ptfA2	A:2-147	UQ_con	216 → 216.1 → 216.1.1
2	B	e3ptfB1	B:1-147	UQ_con	216 → 216.1 → 216.1.1
3	C	e3ptfC1	C:1-73	ubiquitin	221 → 221.1 → 221.1.1
4	D	e3ptfD1	D:0-73	ubiquitin	221 → 221.1 → 221.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors