ECODEvolutionary Classification of Protein Domains

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PDB 3RKO

X-RAY DIFFRACTION3.00 Å12 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ANADH-QUINONE OXIDOREDUCTASE SUBUNIT Aview chain

1 domain

e3rkoA1(A:15-126)

Chain BNADH-QUINONE OXIDOREDUCTASE SUBUNIT Lview chain

1 domain

e3rkoB1(B:1-612)

Chain CNADH-QUINONE OXIDOREDUCTASE SUBUNIT Mview chain

1 domain

e3rkoC1(C:1-504)

Chain DNADH-QUINONE OXIDOREDUCTASE SUBUNIT Nview chain

1 domain

e3rkoD1(D:1-485)

Chain ENADH-QUINONE OXIDOREDUCTASE SUBUNIT Aview chain

1 domain

e3rkoE1(E:15-126)

Chain FNADH-QUINONE OXIDOREDUCTASE SUBUNIT Jview chain

1 domain

e3rkoF1(F:1-168)

Chain GNADH-QUINONE OXIDOREDUCTASE SUBUNIT Kview chain

1 domain

e3rkoG1(G:1-100)

Chain JNADH-QUINONE OXIDOREDUCTASE SUBUNIT Jview chain

1 domain

e3rkoJ1(J:1-168)

Chain KNADH-QUINONE OXIDOREDUCTASE SUBUNIT Kview chain

1 domain

e3rkoK1(K:1-100)

Chain LNADH-QUINONE OXIDOREDUCTASE SUBUNIT Lview chain

1 domain

e3rkoL1(L:1-612)

Chain MNADH-QUINONE OXIDOREDUCTASE SUBUNIT Mview chain

1 domain

e3rkoM1(M:1-504)

Chain NNADH-QUINONE OXIDOREDUCTASE SUBUNIT Nview chain

1 domain

e3rkoN1(N:1-485)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3rkoA1	A:15-126	Oxidored_q4	3456 → 3456.1 → 3456.1.1
2	B	e3rkoB1	B:1-612	Proton_antipo_M,Proton_antipo_N	3281 → 3281.1 → 3281.1.1
3	C	e3rkoC1	C:1-504	Proton_antipo_M	3281 → 3281.1 → 3281.1.1
4	D	e3rkoD1	D:1-485	Proton_antipo_M	3281 → 3281.1 → 3281.1.1
5	E	e3rkoE1	E:15-126	Oxidored_q4	3456 → 3456.1 → 3456.1.1
6	F	e3rkoF1	F:1-168	Oxidored_q3	3579 → 3579.1 → 3579.1.1
7	G	e3rkoG1	G:1-100	Oxidored_q2	3843 → 3843.1 → 3843.1.1
8	J	e3rkoJ1	J:1-168	Oxidored_q3	3579 → 3579.1 → 3579.1.1
9	K	e3rkoK1	K:1-100	Oxidored_q2	3843 → 3843.1 → 3843.1.1
10	L	e3rkoL1	L:1-612	Proton_antipo_M,Proton_antipo_N	3281 → 3281.1 → 3281.1.1
11	M	e3rkoM1	M:1-504	Proton_antipo_M	3281 → 3281.1 → 3281.1.1
12	N	e3rkoN1	N:1-485	Proton_antipo_M	3281 → 3281.1 → 3281.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors