ECODEvolutionary Classification of Protein Domains

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PDB 3U9P

X-RAY DIFFRACTION2.80 Å6 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain CNeutrophil gelatinase-associated lipocalinview chain

1 domain

e3u9pC1(C:1-174)

Chain DNeutrophil gelatinase-associated lipocalinview chain

1 domain

e3u9pD2(D:1-174)

Chain HMonoclonal Fab Fragment Heavy Chainview chain

2 domains

e3u9pH1(H:120-212)e3u9pH2(H:1-119)

Chain KMonoclonal Fab Fragment Heavy Chainview chain

2 domains

e3u9pK1(K:1-119)e3u9pK2(K:120-215)

Chain LMonoclonal Fab Fragment Light Chainview chain

2 domains

e3u9pL1(L:1-107)e3u9pL2(L:108-212)

Chain MMonoclonal Fab Fragment Light Chainview chain

2 domains

e3u9pM1(M:1-107)e3u9pM2(M:108-211)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	C	e3u9pC1	C:1-174	Lipocalin	9 → 9.1 → 9.1.1
2	D	e3u9pD2	D:1-174	Lipocalin	9 → 9.1 → 9.1.1
3	H	e3u9pH1	H:120-212	C1-set	11 → 11.1 → 11.1.1
4	H	e3u9pH2	H:1-119	V-set	11 → 11.1 → 11.1.1
5	K	e3u9pK1	K:1-119	V-set	11 → 11.1 → 11.1.1
6	K	e3u9pK2	K:120-215	C1-set	11 → 11.1 → 11.1.1
7	L	e3u9pL1	L:1-107	V-set	11 → 11.1 → 11.1.1
8	L	e3u9pL2	L:108-212	C1-set	11 → 11.1 → 11.1.1
9	M	e3u9pM1	M:1-107	V-set	11 → 11.1 → 11.1.1
10	M	e3u9pM2	M:108-211	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors