ECODEvolutionary Classification of Protein Domains

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PDB 3VCD

X-RAY DIFFRACTION2.35 Å8 chains16 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain APropanediol utilization polyhedral body protein PduTview chain

2 domains

e3vcdA1(A:88-184)e3vcdA2(A:2-88)

Chain BPropanediol utilization polyhedral body protein PduTview chain

2 domains

e3vcdB1(B:87-184)e3vcdB2(B:1-87)

Chain CPropanediol utilization polyhedral body protein PduTview chain

2 domains

e3vcdC1(C:87-184)e3vcdC2(C:1-87)

Chain DPropanediol utilization polyhedral body protein PduTview chain

2 domains

e3vcdD1(D:87-184)e3vcdD2(D:1-87)

Chain EPropanediol utilization polyhedral body protein PduTview chain

2 domains

e3vcdE1(E:87-184)e3vcdE2(E:1-87)

Chain FPropanediol utilization polyhedral body protein PduTview chain

2 domains

e3vcdF1(F:87-184)e3vcdF2(F:1-87)

Chain GPropanediol utilization polyhedral body protein PduTview chain

2 domains

e3vcdG1(G:87-184)e3vcdG2(G:1-87)

Chain HPropanediol utilization polyhedral body protein PduTview chain

2 domains

e3vcdH1(H:87-184)e3vcdH2(H:1-87)

All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3vcdA1	A:88-184	BMC	304 → 304.54 → 304.54.1
2	A	e3vcdA2	A:2-88	BMC	304 → 304.54 → 304.54.1
3	B	e3vcdB1	B:87-184	BMC	304 → 304.54 → 304.54.1
4	B	e3vcdB2	B:1-87	BMC	304 → 304.54 → 304.54.1
5	C	e3vcdC1	C:87-184	BMC	304 → 304.54 → 304.54.1
6	C	e3vcdC2	C:1-87	BMC	304 → 304.54 → 304.54.1
7	D	e3vcdD1	D:87-184	BMC	304 → 304.54 → 304.54.1
8	D	e3vcdD2	D:1-87	BMC	304 → 304.54 → 304.54.1
9	E	e3vcdE1	E:87-184	BMC	304 → 304.54 → 304.54.1
10	E	e3vcdE2	E:1-87	BMC	304 → 304.54 → 304.54.1
11	F	e3vcdF1	F:87-184	BMC	304 → 304.54 → 304.54.1
12	F	e3vcdF2	F:1-87	BMC	304 → 304.54 → 304.54.1
13	G	e3vcdG1	G:87-184	BMC	304 → 304.54 → 304.54.1
14	G	e3vcdG2	G:1-87	BMC	304 → 304.54 → 304.54.1
15	H	e3vcdH1	H:87-184	BMC	304 → 304.54 → 304.54.1
16	H	e3vcdH2	H:1-87	BMC	304 → 304.54 → 304.54.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors