ECODEvolutionary Classification of Protein Domains

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PDB 3VWK

X-RAY DIFFRACTION2.94 Å4 chains7 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAntigen-presenting glycoprotein CD1dview chain

2 domains

e3vwkA3(A:7-183)e3vwkA4(A:184-277)

Chain BBeta-2-microglobulinview chain

1 domain

e3vwkB1(B:1-96)

Chain CNKT15 T cell receptor alpha-chainview chain

2 domains

e3vwkC1(C:-1-111)e3vwkC2(C:112-199)

Chain DNKT15 T cell receptor beta-chainview chain

2 domains

e3vwkD5(D:122-246)e3vwkD6(D:3-121)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3vwkA3	A:7-183	MHC_I_3	233 → 233.1 → 233.1.1
2	A	e3vwkA4	A:184-277	C1-set	11 → 11.1 → 11.1.1
3	B	e3vwkB1	B:1-96	C1-set	11 → 11.1 → 11.1.1
4	C	e3vwkC1	C:-1-111	V-set	11 → 11.1 → 11.1.1
5	C	e3vwkC2	C:112-199	DUF1968	11 → 11.1 → 11.1.1
6	D	e3vwkD5	D:122-246	C1-set	11 → 11.1 → 11.1.1
7	D	e3vwkD6	D:3-121	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors