ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 4APQ

X-RAY DIFFRACTION3.00 Å4 chains7 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain AANTIGEN-PRESENTING GLYCOPROTEIN CD1D1view chain

2 domains

e4apqA1(A:181-279)e4apqA2(A:6-180)

Chain BBETA-2-MICROGLOBULINview chain

1 domain

e4apqB1(B:1-99)

Chain CMOUSE NKT TCR VALPHA14, HUMAN NKT TCR VALPHA14view chain

2 domains

e4apqC1(C:1-116)e4apqC2(C:117-206)

Chain DMOUSE NKT TCR AUTOREACTIVE-VBETA6, HUMAN NKT TCR AUTOREACTIVE-VBETA6view chain

2 domains

e4apqD1(D:1-121)e4apqD2(D:122-244)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4apqA1	A:181-279	C1-set	11 → 11.1 → 11.1.1
2	A	e4apqA2	A:6-180	MHC_I_3	233 → 233.1 → 233.1.1
3	B	e4apqB1	B:1-99	C1-set	11 → 11.1 → 11.1.1
4	C	e4apqC1	C:1-116	V-set	11 → 11.1 → 11.1.1
5	C	e4apqC2	C:117-206	DUF1968	11 → 11.1 → 11.1.1
6	D	e4apqD1	D:1-121	V-set	11 → 11.1 → 11.1.1
7	D	e4apqD2	D:122-244	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors