ECODEvolutionary Classification of Protein Domains

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PDB 4GKO

X-RAY DIFFRACTION3.30 Å12 chains18 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AIg epsilon chain C regionview chain

2 domains

e4gkoA1(A:335-428)e4gkoA2(A:429-545)

Chain BIg epsilon chain C regionview chain

2 domains

e4gkoB1(B:336-428)e4gkoB2(B:429-545)

Chain CIg epsilon chain C regionview chain

2 domains

e4gkoC1(C:439-545)e4gkoC2(C:336-438)

Chain DIg epsilon chain C regionview chain

2 domains

e4gkoD3(D:439-541)e4gkoD4(D:335-438)

Chain EIg epsilon chain C regionview chain

2 domains

e4gkoE3(E:439-540)e4gkoE4(E:335-438)

Chain FIg epsilon chain C regionview chain

2 domains

e4gkoF5(F:439-539)e4gkoF6(F:336-438)

Chain GLow affinity immunoglobulin epsilon Fc receptorview chain

1 domain

e4gkoG1(G:158-292)

Chain HLow affinity immunoglobulin epsilon Fc receptorview chain

1 domain

e4gkoH1(H:158-290)

Chain ILow affinity immunoglobulin epsilon Fc receptorview chain

1 domain

e4gkoI1(I:158-291)

Chain JLow affinity immunoglobulin epsilon Fc receptorview chain

1 domain

e4gkoJ1(J:158-292)

Chain KLow affinity immunoglobulin epsilon Fc receptorview chain

1 domain

e4gkoK1(K:157-291)

Chain LLow affinity immunoglobulin epsilon Fc receptorview chain

1 domain

e4gkoL1(L:158-293)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4gkoA1	A:335-428	C1-set	11 → 11.1 → 11.1.1
2	A	e4gkoA2	A:429-545	C1-set	11 → 11.1 → 11.1.1
3	B	e4gkoB1	B:336-428	C1-set	11 → 11.1 → 11.1.1
4	B	e4gkoB2	B:429-545	C1-set	11 → 11.1 → 11.1.1
5	C	e4gkoC1	C:439-545	C1-set	11 → 11.1 → 11.1.1
6	C	e4gkoC2	C:336-438	C1-set	11 → 11.1 → 11.1.1
7	D	e4gkoD3	D:439-541	C1-set	11 → 11.1 → 11.1.1
8	D	e4gkoD4	D:335-438	C1-set	11 → 11.1 → 11.1.1
9	E	e4gkoE3	E:439-540	C1-set	11 → 11.1 → 11.1.1
10	E	e4gkoE4	E:335-438	C1-set	11 → 11.1 → 11.1.1
11	F	e4gkoF5	F:439-539	C1-set	11 → 11.1 → 11.1.1
12	F	e4gkoF6	F:336-438	C1-set	11 → 11.1 → 11.1.1
13	G	e4gkoG1	G:158-292	Lectin_C	209 → 209.1 → 209.1.1
14	H	e4gkoH1	H:158-290	Lectin_C	209 → 209.1 → 209.1.1
15	I	e4gkoI1	I:158-291	Lectin_C	209 → 209.1 → 209.1.1
16	J	e4gkoJ1	J:158-292	Lectin_C	209 → 209.1 → 209.1.1
17	K	e4gkoK1	K:157-291	Lectin_C	209 → 209.1 → 209.1.1
18	L	e4gkoL1	L:158-293	Lectin_C	209 → 209.1 → 209.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors