ECODEvolutionary Classification of Protein Domains

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PDB 4IRJ

X-RAY DIFFRACTION3.00 Å4 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAntigen-presenting glycoprotein CD1d1view chain

2 domains

e4irjA1(A:183-279)e4irjA2(A:7-182)

Chain BBeta-2-microglobulinview chain

1 domain

e4irjB1(B:2-97)

Chain CValpha14 (mouse variable domain, human constant domain)view chain

2 domains

e4irjC1(C:2-115)e4irjC2(C:116-204)

Chain DVbeta8.2 (mouse variable domain, human constant domain)view chain

2 domains

e4irjD3(D:116-240)e4irjD4(D:2-115)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4irjA1	A:183-279	C1-set	11 → 11.1 → 11.1.1
2	A	e4irjA2	A:7-182	MHC_I_3	233 → 233.1 → 233.1.1
3	B	e4irjB1	B:2-97	C1-set	11 → 11.1 → 11.1.1
4	C	e4irjC1	C:2-115	V-set	11 → 11.1 → 11.1.1
5	C	e4irjC2	C:116-204	DUF1968	11 → 11.1 → 11.1.1
6	D	e4irjD3	D:116-240	C1-set	11 → 11.1 → 11.1.1
7	D	e4irjD4	D:2-115	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors