ECODEvolutionary Classification of Protein Domains

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PDB 4JAN

X-RAY DIFFRACTION3.15 Å6 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AANTIGEN BINDING FRAGMENT OF HEAVY CHAIN of CH103view chain

2 domains

e4janA1(A:1-113)e4janA2(A:114-210)

Chain BANTIGEN BINDING FRAGMENT OF LIGHT CHAIN of CH103view chain

2 domains

e4janB3(B:107-209)e4janB4(B:2-106A)

Chain GENVELOPE GLYCOPROTEIN GP120 of HIV-1 clade Cview chain

1 domain

e4janG1(G:255-420,G:440-472)

Chain HANTIGEN BINDING FRAGMENT OF HEAVY CHAIN of CH103view chain

2 domains

e4janH1(H:1-113)e4janH2(H:114-210)

Chain IENVELOPE GLYCOPROTEIN GP120 of HIV-1 clade Cview chain

1 domain

e4janI1(I:256-421,I:441-472)

Chain LANTIGEN BINDING FRAGMENT OF LIGHT CHAIN of CH103view chain

2 domains

e4janL3(L:107-209)e4janL4(L:2-106A)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4janA1	A:1-113	V-set	11 → 11.1 → 11.1.1
2	A	e4janA2	A:114-210	C1-set	11 → 11.1 → 11.1.1
3	B	e4janB3	B:107-209	C1-set	11 → 11.1 → 11.1.1
4	B	e4janB4	B:2-106A	V-set	11 → 11.1 → 11.1.1
5	G	e4janG1	G:255-420,G:440-472	GP120	259 → 259.1 → 259.1.1
6	H	e4janH1	H:1-113	V-set	11 → 11.1 → 11.1.1
7	H	e4janH2	H:114-210	C1-set	11 → 11.1 → 11.1.1
8	I	e4janI1	I:256-421,I:441-472	GP120	259 → 259.1 → 259.1.1
9	L	e4janL3	L:107-209	C1-set	11 → 11.1 → 11.1.1
10	L	e4janL4	L:2-106A	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors