ECODEvolutionary Classification of Protein Domains

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PDB 4JCD

X-RAY DIFFRACTION2.00 Å5 chains5 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AMajor capsid protein VP1view chain

1 domain

e4jcdA1(A:24-288)

Chain BMajor capsid protein VP1view chain

1 domain

e4jcdB1(B:24-288)

Chain CMajor capsid protein VP1view chain

1 domain

e4jcdC1(C:25-288)

Chain DMajor capsid protein VP1view chain

1 domain

e4jcdD1(D:24-288)

Chain EMajor capsid protein VP1view chain

1 domain

e4jcdE1(E:24-288)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4jcdA1	A:24-288	Polyoma_coat	10 → 10.2 → 10.2.1
2	B	e4jcdB1	B:24-288	Polyoma_coat	10 → 10.2 → 10.2.1
3	C	e4jcdC1	C:25-288	Polyoma_coat	10 → 10.2 → 10.2.1
4	D	e4jcdD1	D:24-288	Polyoma_coat	10 → 10.2 → 10.2.1
5	E	e4jcdE1	E:24-288	Polyoma_coat	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors