ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 4LMQ

X-RAY DIFFRACTION2.77 Å6 chains10 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain DStromal cell-derived factor 1view chain

1 domain

e4lmqD1(D:11-68)

Chain Ehu30D8 Fab heavy chainview chain

2 domains

e4lmqE3(E:114-213)e4lmqE4(E:1-113)

Chain FStromal cell-derived factor 1view chain

1 domain

e4lmqF1(F:8-65)

Chain Hhu30D8 Fab heavy chainview chain

2 domains

e4lmqH1(H:114-213)e4lmqH2(H:1-113)

Chain Ihu30D8 Fab light chainview chain

2 domains

e4lmqI1(I:108-214)e4lmqI2(I:1-107)

Chain Lhu30D8 Fab light chainview chain

2 domains

e4lmqL1(L:108-214)e4lmqL2(L:1-107)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	D	e4lmqD1	D:11-68	IL8	1170 → 1170.1 → 1170.1.1
2	E	e4lmqE3	E:114-213	C1-set	11 → 11.1 → 11.1.1
3	E	e4lmqE4	E:1-113	V-set	11 → 11.1 → 11.1.1
4	F	e4lmqF1	F:8-65	IL8	1170 → 1170.1 → 1170.1.1
5	H	e4lmqH1	H:114-213	C1-set	11 → 11.1 → 11.1.1
6	H	e4lmqH2	H:1-113	V-set	11 → 11.1 → 11.1.1
7	I	e4lmqI1	I:108-214	C1-set	11 → 11.1 → 11.1.1
8	I	e4lmqI2	I:1-107	V-set	11 → 11.1 → 11.1.1
9	L	e4lmqL1	L:108-214	C1-set	11 → 11.1 → 11.1.1
10	L	e4lmqL2	L:1-107	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors