ECODEvolutionary Classification of Protein Domains

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PDB 4M78

X-RAY DIFFRACTION2.79 Å14 chains14 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AU6 snRNA-associated Sm-like protein LSm8view chain

1 domain

e4m78A1(A:1-67)

Chain BU6 snRNA-associated Sm-like protein LSm2view chain

1 domain

e4m78B1(B:1-91)

Chain CU6 snRNA-associated Sm-like protein LSm3view chain

1 domain

e4m78C1(C:3-79)

Chain DU6 snRNA-associated Sm-like protein LSm6view chain

1 domain

e4m78D1(D:10-84)

Chain EU6 snRNA-associated Sm-like protein LSm5view chain

1 domain

e4m78E1(E:6-84)

Chain FU6 snRNA-associated Sm-like protein LSm7view chain

1 domain

e4m78F1(F:27-105)

Chain GU6 snRNA-associated Sm-like protein LSm4view chain

1 domain

e4m78G1(G:1-86)

Chain HU6 snRNA-associated Sm-like protein LSm8view chain

1 domain

e4m78H1(H:1-67)

Chain IU6 snRNA-associated Sm-like protein LSm2view chain

1 domain

e4m78I1(I:1-91)

Chain JU6 snRNA-associated Sm-like protein LSm3view chain

1 domain

e4m78J1(J:3-79)

Chain KU6 snRNA-associated Sm-like protein LSm6view chain

1 domain

e4m78K1(K:11-84)

Chain LU6 snRNA-associated Sm-like protein LSm5view chain

1 domain

e4m78L1(L:4-84)

Chain MU6 snRNA-associated Sm-like protein LSm7view chain

1 domain

e4m78M1(M:27-105)

Chain NU6 snRNA-associated Sm-like protein LSm4view chain

1 domain

e4m78N1(N:1-87)

All Domains (14)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4m78A1	A:1-67	LSM	4 → 4.1 → 4.1.1
2	B	e4m78B1	B:1-91	LSM	4 → 4.1 → 4.1.1
3	C	e4m78C1	C:3-79	LSM	4 → 4.1 → 4.1.1
4	D	e4m78D1	D:10-84	LSM	4 → 4.1 → 4.1.1
5	E	e4m78E1	E:6-84	LSM	4 → 4.1 → 4.1.1
6	F	e4m78F1	F:27-105	LSM	4 → 4.1 → 4.1.1
7	G	e4m78G1	G:1-86	LSM	4 → 4.1 → 4.1.1
8	H	e4m78H1	H:1-67	LSM	4 → 4.1 → 4.1.1
9	I	e4m78I1	I:1-91	LSM	4 → 4.1 → 4.1.1
10	J	e4m78J1	J:3-79	LSM	4 → 4.1 → 4.1.1
11	K	e4m78K1	K:11-84	LSM	4 → 4.1 → 4.1.1
12	L	e4m78L1	L:4-84	LSM	4 → 4.1 → 4.1.1
13	M	e4m78M1	M:27-105	LSM	4 → 4.1 → 4.1.1
14	N	e4m78N1	N:1-87	LSM	4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors