ECODEvolutionary Classification of Protein Domains

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PDB 4MBY

X-RAY DIFFRACTION1.48 Å10 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AMajor Capsid Protein VP1view chain

1 domain

e4mbyA1(A:25-301)

Chain BMajor Capsid Protein VP1view chain

1 domain

e4mbyB1(B:25-299)

Chain CMajor Capsid Protein VP1view chain

1 domain

e4mbyC1(C:25-299)

Chain DMajor Capsid Protein VP1view chain

1 domain

e4mbyD1(D:25-299)

Chain EMajor Capsid Protein VP1view chain

1 domain

e4mbyE1(E:25-301)

Chain FMajor Capsid Protein VP1view chain

1 domain

e4mbyF1(F:25-298)

Chain GMajor Capsid Protein VP1view chain

1 domain

e4mbyG1(G:25-297)

Chain HMajor Capsid Protein VP1view chain

1 domain

e4mbyH1(H:25-298)

Chain IMajor Capsid Protein VP1view chain

1 domain

e4mbyI1(I:25-298)

Chain JMajor Capsid Protein VP1view chain

1 domain

e4mbyJ1(J:25-299)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4mbyA1	A:25-301	Polyoma_coat	10 → 10.2 → 10.2.1
2	B	e4mbyB1	B:25-299	Polyoma_coat	10 → 10.2 → 10.2.1
3	C	e4mbyC1	C:25-299	Polyoma_coat	10 → 10.2 → 10.2.1
4	D	e4mbyD1	D:25-299	Polyoma_coat	10 → 10.2 → 10.2.1
5	E	e4mbyE1	E:25-301	Polyoma_coat	10 → 10.2 → 10.2.1
6	F	e4mbyF1	F:25-298	Polyoma_coat	10 → 10.2 → 10.2.1
7	G	e4mbyG1	G:25-297	Polyoma_coat	10 → 10.2 → 10.2.1
8	H	e4mbyH1	H:25-298	Polyoma_coat	10 → 10.2 → 10.2.1
9	I	e4mbyI1	I:25-298	Polyoma_coat	10 → 10.2 → 10.2.1
10	J	e4mbyJ1	J:25-299	Polyoma_coat	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors