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PDB 4N9F

X-RAY DIFFRACTION3.30 Å60 chains60 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 0Core-binding factor subunit betaview chain
1 domain
Chain 1Virion infectivity factorview chain
1 domain
Chain 2Virion infectivity factorview chain
1 domain
Chain 3Cullin-5view chain
1 domain
Chain 4Transcription elongation factor B polypeptide 2view chain
1 domain
Chain 5Transcription elongation factor B polypeptide 1view chain
1 domain
Chain 6Core-binding factor subunit betaview chain
1 domain
Chain 7Virion infectivity factorview chain
1 domain
Chain 9Cullin-5view chain
1 domain
Chain aCore-binding factor subunit betaview chain
1 domain
Chain bVirion infectivity factorview chain
1 domain
Chain BTranscription elongation factor B polypeptide 1view chain
1 domain
Chain cCore-binding factor subunit betaview chain
1 domain
Chain CCullin-5view chain
1 domain
Chain dVirion infectivity factorview chain
1 domain
Chain DTranscription elongation factor B polypeptide 2view chain
1 domain
Chain eTranscription elongation factor B polypeptide 2view chain
1 domain
Chain ETranscription elongation factor B polypeptide 1view chain
1 domain
Chain fCullin-5view chain
1 domain
Chain FCore-binding factor subunit betaview chain
1 domain
Chain gTranscription elongation factor B polypeptide 2view chain
1 domain
Chain GVirion infectivity factorview chain
1 domain
Chain hTranscription elongation factor B polypeptide 1view chain
1 domain
Chain HTranscription elongation factor B polypeptide 2view chain
1 domain
Chain iCore-binding factor subunit betaview chain
1 domain
Chain ICullin-5view chain
1 domain
Chain jVirion infectivity factorview chain
1 domain
Chain JTranscription elongation factor B polypeptide 2view chain
1 domain
Chain kCore-binding factor subunit betaview chain
1 domain
Chain KTranscription elongation factor B polypeptide 1view chain
1 domain
Chain lCullin-5view chain
1 domain
Chain LCore-binding factor subunit betaview chain
1 domain
Chain mTranscription elongation factor B polypeptide 2view chain
1 domain
Chain MVirion infectivity factorview chain
1 domain
Chain nTranscription elongation factor B polypeptide 1view chain
1 domain
Chain NCore-binding factor subunit betaview chain
1 domain
Chain oCore-binding factor subunit betaview chain
1 domain
Chain OCullin-5view chain
1 domain
Chain pVirion infectivity factorview chain
1 domain
Chain PTranscription elongation factor B polypeptide 2view chain
1 domain
Chain qVirion infectivity factorview chain
1 domain
Chain QTranscription elongation factor B polypeptide 1view chain
1 domain
Chain rCullin-5view chain
1 domain
Chain RCore-binding factor subunit betaview chain
1 domain
Chain sTranscription elongation factor B polypeptide 2view chain
1 domain
Chain SVirion infectivity factorview chain
1 domain
Chain tTranscription elongation factor B polypeptide 1view chain
1 domain
Chain TTranscription elongation factor B polypeptide 1view chain
1 domain
Chain uCore-binding factor subunit betaview chain
1 domain
Chain UCullin-5view chain
1 domain
Chain vVirion infectivity factorview chain
1 domain
Chain VCullin-5view chain
1 domain
Chain wCullin-5view chain
1 domain
Chain WTranscription elongation factor B polypeptide 2view chain
1 domain
Chain xCullin-5view chain
1 domain
Chain XTranscription elongation factor B polypeptide 2view chain
1 domain
Chain yTranscription elongation factor B polypeptide 2view chain
1 domain
Chain YTranscription elongation factor B polypeptide 1view chain
1 domain
Chain zTranscription elongation factor B polypeptide 1view chain
1 domain
Chain ZTranscription elongation factor B polypeptide 1view chain
1 domain

All Domains (60)

#ChainDomain IDRangeFamilyClassification
10e4n9f010:5-135CBF_beta517 → 517.1 → 517.1.1
21e4n9f111:3-173Vif3800 → 3800.1 → 3800.1.1
32e4n9f212:3-173Vif3800 → 3800.1 → 3800.1.1
43e4n9f313:11-319Cullin109 → 109.4 → 109.4.1
54e4n9f414:1-98ubiquitin221 → 221.1 → 221.1.1
65e4n9f515:17-111Skp1_POZ226 → 226.1 → 226.1.1
76e4n9f616:6-135CBF_beta517 → 517.1 → 517.1.1
87e4n9f717:3-172Vif3800 → 3800.1 → 3800.1.1
99e4n9f919:11-319Cullin109 → 109.4 → 109.4.1
10ae4n9fa1a:3-135CBF_beta517 → 517.1 → 517.1.1
11be4n9fb1b:1-172Vif3800 → 3800.1 → 3800.1.1
12Be4n9fB1B:17-111Skp1_POZ226 → 226.1 → 226.1.1
13ce4n9fc1c:5-135CBF_beta517 → 517.1 → 517.1.1
14Ce4n9fC1C:11-320Cullin109 → 109.4 → 109.4.1
15de4n9fd1d:3-172Vif3800 → 3800.1 → 3800.1.1
16De4n9fD1D:1-98ubiquitin221 → 221.1 → 221.1.1
17ee4n9fe1e:1-79ubiquitin221 → 221.1 → 221.1.1
18Ee4n9fE1E:17-111Skp1_POZ226 → 226.1 → 226.1.1
19fe4n9ff1f:11-320Cullin109 → 109.4 → 109.4.1
20Fe4n9fF1F:3-135CBF_beta517 → 517.1 → 517.1.1
21ge4n9fg1g:1-98ubiquitin221 → 221.1 → 221.1.1
22Ge4n9fG1G:3-172Vif3800 → 3800.1 → 3800.1.1
23he4n9fh1h:17-111Skp1_POZ226 → 226.1 → 226.1.1
24He4n9fH1H:1-98ubiquitin221 → 221.1 → 221.1.1
25ie4n9fi1i:2-135CBF_beta517 → 517.1 → 517.1.1
26Ie4n9fI1I:11-320Cullin109 → 109.4 → 109.4.1
27je4n9fj1j:2-171Vif3800 → 3800.1 → 3800.1.1
28Je4n9fJ1J:2-98ubiquitin221 → 221.1 → 221.1.1
29ke4n9fk1k:5-135CBF_beta517 → 517.1 → 517.1.1
30Ke4n9fK1K:18-111Skp1_POZ226 → 226.1 → 226.1.1
31le4n9fl1l:11-320Cullin109 → 109.4 → 109.4.1
32Le4n9fL1L:5-135CBF_beta517 → 517.1 → 517.1.1
33me4n9fm1m:1-98ubiquitin221 → 221.1 → 221.1.1
34Me4n9fM1M:2-172Vif3800 → 3800.1 → 3800.1.1
35ne4n9fn1n:17-111Skp1_POZ226 → 226.1 → 226.1.1
36Ne4n9fN1N:5-135CBF_beta517 → 517.1 → 517.1.1
37oe4n9fo1o:5-135CBF_beta517 → 517.1 → 517.1.1
38Oe4n9fO1O:11-320Cullin109 → 109.4 → 109.4.1
39pe4n9fp1p:3-171Vif3800 → 3800.1 → 3800.1.1
40Pe4n9fP1P:1-98ubiquitin221 → 221.1 → 221.1.1
41qe4n9fq1q:3-171Vif3800 → 3800.1 → 3800.1.1
42Qe4n9fQ1Q:17-111Skp1_POZ226 → 226.1 → 226.1.1
43re4n9fr1r:11-320Cullin109 → 109.4 → 109.4.1
44Re4n9fR1R:5-157CBF_beta517 → 517.1 → 517.1.1
45se4n9fs1s:1-98ubiquitin221 → 221.1 → 221.1.1
46Se4n9fS1S:3-173Vif3800 → 3800.1 → 3800.1.1
47te4n9ft1t:17-111Skp1_POZ226 → 226.1 → 226.1.1
48Te4n9fT1T:17-111Skp1_POZ226 → 226.1 → 226.1.1
49ue4n9fu1u:5-135CBF_beta517 → 517.1 → 517.1.1
50Ue4n9fU1U:11-321Cullin109 → 109.4 → 109.4.1
51ve4n9fv1v:3-173Vif3800 → 3800.1 → 3800.1.1
52Ve4n9fV1V:11-320Cullin109 → 109.4 → 109.4.1
53we4n9fw1w:11-319Cullin109 → 109.4 → 109.4.1
54We4n9fW1W:1-98ubiquitin221 → 221.1 → 221.1.1
55xe4n9fx1x:12-319Cullin109 → 109.4 → 109.4.1
56Xe4n9fX1X:1-98ubiquitin221 → 221.1 → 221.1.1
57ye4n9fy1y:1-98ubiquitin221 → 221.1 → 221.1.1
58Ye4n9fY1Y:17-111Skp1_POZ226 → 226.1 → 226.1.1
59ze4n9fz1z:17-111Skp1_POZ226 → 226.1 → 226.1.1
60Ze4n9fZ1Z:17-111Skp1_POZ226 → 226.1 → 226.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors