ECODEvolutionary Classification of Protein Domains

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PDB 4NHU

X-RAY DIFFRACTION2.90 Å6 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain A2C m33 alpha VmCh chimeraview chain

2 domains

e4nhuA1(A:113-199)e4nhuA2(A:2-112)

Chain B2C m33 beta VmCh chimeraview chain

2 domains

e4nhuB1(B:115-239)e4nhuB2(B:2-114)

Chain C2C m33 alpha VmCh chimeraview chain

2 domains

e4nhuC1(C:113-200)e4nhuC2(C:2-112)

Chain D2C m33 beta VmCh chimeraview chain

2 domains

e4nhuD1(D:2-114)e4nhuD2(D:115-239)

Chain EH-2 class I histocompatibility antigen, L-D alpha chainview chain

1 domain

e4nhuE1(E:1-180,E:195-203)

Chain GH-2 class I histocompatibility antigen, L-D alpha chainview chain

1 domain

e4nhuG1(G:1-180,G:195-203)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4nhuA1	A:113-199	DUF1968	11 → 11.1 → 11.1.1
2	A	e4nhuA2	A:2-112	V-set	11 → 11.1 → 11.1.1
3	B	e4nhuB1	B:115-239	C1-set	11 → 11.1 → 11.1.1
4	B	e4nhuB2	B:2-114	V-set	11 → 11.1 → 11.1.1
5	C	e4nhuC1	C:113-200	DUF1968	11 → 11.1 → 11.1.1
6	C	e4nhuC2	C:2-112	V-set	11 → 11.1 → 11.1.1
7	D	e4nhuD1	D:2-114	V-set	11 → 11.1 → 11.1.1
8	D	e4nhuD2	D:115-239	C1-set	11 → 11.1 → 11.1.1
9	E	e4nhuE1	E:1-180,E:195-203	MHC_I	233 → 233.1 → 233.1.1
10	G	e4nhuG1	G:1-180,G:195-203	MHC_I	233 → 233.1 → 233.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors