ECODEvolutionary Classification of Protein Domains

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PDB 4ODB

X-RAY DIFFRACTION3.20 Å6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AOuter capsid protein sigma-1view chain

1 domain

e4odbA1(A:308-469)

Chain BOuter capsid protein sigma-1view chain

1 domain

e4odbB1(B:330-469)

Chain COuter capsid protein sigma-1view chain

1 domain

e4odbC1(C:330-469)

Chain DJunctional adhesion molecule Aview chain

1 domain

e4odbD1(D:28-129)

Chain EJunctional adhesion molecule Aview chain

1 domain

e4odbE1(E:28-129)

Chain FJunctional adhesion molecule Aview chain

1 domain

e4odbF1(F:28-129)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4odbA1	A:308-469	Reo_sigma1	5092 → 5092.1 → 5092.1.1
2	B	e4odbB1	B:330-469	Reo_sigma1	5092 → 5092.1 → 5092.1.1
3	C	e4odbC1	C:330-469	Reo_sigma1	5092 → 5092.1 → 5092.1.1
4	D	e4odbD1	D:28-129	V-set	11 → 11.1 → 11.1.1
5	E	e4odbE1	E:28-129	V-set	11 → 11.1 → 11.1.1
6	F	e4odbF1	F:28-129	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors