ECODEvolutionary Classification of Protein Domains

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PDB 4QDL

X-RAY DIFFRACTION2.70 Å6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACRISPR-associated endonuclease Cas1view chain

1 domain

e4qdlA1(A:13-280)

Chain BCRISPR-associated endonuclease Cas1view chain

1 domain

e4qdlB1(B:4-283)

Chain CCRISPR-associated endonuclease Cas1view chain

1 domain

e4qdlC1(C:14-280)

Chain DCRISPR-associated endonuclease Cas1view chain

1 domain

e4qdlD1(D:4-282)

Chain ECRISPR-associated endoribonuclease Cas2view chain

1 domain

e4qdlE1(E:2-94)

Chain FCRISPR-associated endoribonuclease Cas2view chain

1 domain

e4qdlF1(F:2-94)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4qdlA1	A:13-280	Cas_Cas1	3239 → 3239.1 → 3239.1.1
2	B	e4qdlB1	B:4-283	Cas_Cas1	3239 → 3239.1 → 3239.1.1
3	C	e4qdlC1	C:14-280	Cas_Cas1	3239 → 3239.1 → 3239.1.1
4	D	e4qdlD1	D:4-282	Cas_Cas1	3239 → 3239.1 → 3239.1.1
5	E	e4qdlE1	E:2-94	Cas_Cas2CT1978	304 → 304.56 → 304.56.1
6	F	e4qdlF1	F:2-94	Cas_Cas2CT1978	304 → 304.56 → 304.56.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors