ECODEvolutionary Classification of Protein Domains

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PDB 4RQP

X-RAY DIFFRACTION3.15 Å15 chains15 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACapsid protein VP1view chain

1 domain

e4rqpA1(A:74-296)

Chain BCapsid protein VP3view chain

1 domain

e4rqpB1(B:1-238)

Chain CCapsid protein VP0view chain

1 domain

e4rqpC1(C:82-319)

Chain ECapsid protein VP1view chain

1 domain

e4rqpE1(E:74-296)

Chain FCapsid protein VP3view chain

1 domain

e4rqpF1(F:1-238)

Chain GCapsid protein VP0view chain

1 domain

e4rqpG1(G:82-319)

Chain ICapsid protein VP1view chain

1 domain

e4rqpI1(I:74-296)

Chain JCapsid protein VP3view chain

1 domain

e4rqpJ1(J:1-238)

Chain KCapsid protein VP0view chain

1 domain

e4rqpK1(K:82-319)

Chain MCapsid protein VP1view chain

1 domain

e4rqpM1(M:74-296)

Chain NCapsid protein VP3view chain

1 domain

e4rqpN1(N:1-238)

Chain OCapsid protein VP0view chain

1 domain

e4rqpO1(O:82-319)

Chain QCapsid protein VP1view chain

1 domain

e4rqpQ1(Q:74-296)

Chain RCapsid protein VP3view chain

1 domain

e4rqpR1(R:1-238)

Chain SCapsid protein VP0view chain

1 domain

e4rqpS1(S:82-319)

All Domains (15)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4rqpA1	A:74-296	Rhv_5	10 → 10.2 → 10.2.1
2	B	e4rqpB1	B:1-238	Rhv	10 → 10.2 → 10.2.1
3	C	e4rqpC1	C:82-319	Rhv	10 → 10.2 → 10.2.1
4	E	e4rqpE1	E:74-296	Rhv_5	10 → 10.2 → 10.2.1
5	F	e4rqpF1	F:1-238	Rhv	10 → 10.2 → 10.2.1
6	G	e4rqpG1	G:82-319	Rhv	10 → 10.2 → 10.2.1
7	I	e4rqpI1	I:74-296	Rhv_5	10 → 10.2 → 10.2.1
8	J	e4rqpJ1	J:1-238	Rhv	10 → 10.2 → 10.2.1
9	K	e4rqpK1	K:82-319	Rhv	10 → 10.2 → 10.2.1
10	M	e4rqpM1	M:74-296	Rhv_5	10 → 10.2 → 10.2.1
11	N	e4rqpN1	N:1-238	Rhv	10 → 10.2 → 10.2.1
12	O	e4rqpO1	O:82-319	Rhv	10 → 10.2 → 10.2.1
13	Q	e4rqpQ1	Q:74-296	Rhv_5	10 → 10.2 → 10.2.1
14	R	e4rqpR1	R:1-238	Rhv	10 → 10.2 → 10.2.1
15	S	e4rqpS1	S:82-319	Rhv	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors