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PDB 4UJD

ELECTRON MICROSCOPY83 chains95 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aa60S RIBOSOMAL PROTEIN L27Aview chain
1 domain
Chain AA60S RIBOSOMAL PROTEIN L8view chain
2 domains
Chain Ab60S RIBOSOMAL PROTEIN L29view chain
1 domain
Chain AB60S RIBOSOMAL PROTEIN L3view chain
1 domain
Chain Ac60S RIBOSOMAL PROTEIN L30view chain
1 domain
Chain AC60S RIBOSOMAL PROTEIN L4view chain
2 domains
Chain Ad60S RIBOSOMAL PROTEIN L31view chain
1 domain
Chain AD60S RIBOSOMAL PROTEIN L5view chain
1 domain
Chain Ae60S RIBOSOMAL PROTEIN L32view chain
1 domain
Chain AE60S RIBOSOMAL PROTEIN L6view chain
1 domain
Chain Af60S RIBOSOMAL PROTEIN L35Aview chain
1 domain
Chain AF60S RIBOSOMAL PROTEIN L7view chain
1 domain
Chain Ag60S RIBOSOMAL PROTEIN L34view chain
1 domain
Chain AG60S RIBOSOMAL PROTEIN L7Aview chain
1 domain
Chain Ah60S RIBOSOMAL PROTEIN L35view chain
1 domain
Chain AH60S RIBOSOMAL PROTEIN L9view chain
2 domains
Chain Ai60S RIBOSOMAL PROTEIN L36view chain
1 domain
Chain AI60S RIBOSOMAL PROTEIN L10view chain
1 domain
Chain Aj60S RIBOSOMAL PROTEIN L37view chain
1 domain
Chain AJ60S RIBOSOMAL PROTEIN L11view chain
1 domain
Chain Ak60S RIBOSOMAL PROTEIN L38view chain
1 domain
Chain Al60S RIBOSOMAL PROTEIN L39view chain
1 domain
Chain AL60S RIBOSOMAL PROTEIN L13view chain
1 domain
Chain AmUBIQUITIN-60S RIBOSOMAL PROTEIN L40view chain
1 domain
Chain AM60S RIBOSOMAL PROTEIN L14view chain
1 domain
Chain An60S RIBOSOMAL PROTEIN L41view chain
1 domain
Chain AN60S RIBOSOMAL PROTEIN L15view chain
1 domain
Chain Ao60S RIBOSOMAL PROTEIN L36Aview chain
1 domain
Chain AO60S RIBOSOMAL PROTEIN L13Aview chain
1 domain
Chain Ap60S RIBOSOMAL PROTEIN L37Aview chain
1 domain
Chain AP60S RIBOSOMAL PROTEIN L17view chain
1 domain
Chain AQ60S RIBOSOMAL PROTEIN L18view chain
1 domain
Chain AR60S RIBOSOMAL PROTEIN L19view chain
2 domains
Chain AS60S RIBOSOMAL PROTEIN L18Aview chain
2 domains
Chain At60S RIBOSOMAL PROTEIN L28view chain
1 domain
Chain AT60S RIBOSOMAL PROTEIN L21view chain
1 domain
Chain Au60S RIBOSOMAL PROTEIN L10Aview chain
2 domains
Chain AU60S RIBOSOMAL PROTEIN L22view chain
1 domain
Chain AV60S RIBOSOMAL PROTEIN L23view chain
1 domain
Chain AW60S RIBOSOMAL PROTEIN L24view chain
1 domain
Chain AX60S RIBOSOMAL PROTEIN L23Aview chain
1 domain
Chain AY60S RIBOSOMAL PROTEIN L26view chain
1 domain
Chain AZ60S RIBOSOMAL PROTEIN L27view chain
1 domain
Chain Ca40S RIBOSOMAL PROTEIN ES26view chain
1 domain
Chain CA40S RIBOSOMAL PROTEIN US2view chain
1 domain
Chain Cb40S RIBOSOMAL PROTEIN ES27view chain
1 domain
Chain CB40S RIBOSOMAL PROTEIN ES1view chain
2 domains
Chain Cc40S RIBOSOMAL PROTEIN ES28view chain
1 domain
Chain Cd40S RIBOSOMAL PROTEIN US14view chain
1 domain
Chain CD40S RIBOSOMAL PROTEIN US3view chain
2 domains
Chain Ce40S RIBOSOMAL PROTEIN ES30view chain
1 domain
Chain Cf40S RIBOSOMAL PROTEIN ES31view chain
1 domain
Chain CF40S RIBOSOMAL PROTEIN US7view chain
1 domain
Chain Cg40S RIBOSOMAL PROTEIN RACK1view chain
1 domain
Chain CG40S RIBOSOMAL PROTEIN ES6view chain
1 domain
Chain CH40S RIBOSOMAL PROTEIN ES7view chain
2 domains
Chain CI40S RIBOSOMAL PROTEIN ES8view chain
1 domain
Chain CJ40S RIBOSOMAL PROTEIN US4view chain
1 domain
Chain CK40S RIBOSOMAL PROTEIN ES10view chain
1 domain
Chain CL40S RIBOSOMAL PROTEIN US17view chain
1 domain
Chain CM40S RIBOSOMAL PROTEIN ES12view chain
1 domain
Chain CN40S RIBOSOMAL PROTEIN ES15view chain
2 domains
Chain CO40S RIBOSOMAL PROTEIN ES11view chain
1 domain
Chain CP40S RIBOSOMAL PROTEIN US19view chain
1 domain
Chain CQ40S RIBOSOMAL PROTEIN US9view chain
1 domain
Chain CR40S RIBOSOMAL PROTEIN ES17view chain
1 domain
Chain CS40S RIBOSOMAL PROTEIN US13view chain
1 domain
Chain CT40S RIBOSOMAL PROTEIN ES19view chain
1 domain
Chain CU40S RIBOSOMAL PROTEIN US10view chain
1 domain
Chain CV40S RIBOSOMAL PROTEIN ES21view chain
1 domain
Chain CW40S RIBOSOMAL PROTEIN US8view chain
2 domains
Chain CX40S RIBOSOMAL PROTEIN US12view chain
1 domain
Chain CY40S RIBOSOMAL PROTEIN ES24view chain
1 domain
Chain CZ40S RIBOSOMAL PROTEIN ES25view chain
1 domain

All Domains (95)

#ChainDomain IDRangeFamilyClassification
1Aae4ujdAa1Aa:2-148Ribosomal_L27A2490 → 2490.3 → 2490.3.1
2AAe4ujdAA1AA:2-96Ribosomal_L22 → 2.1 → 2.1.1
3AAe4ujdAA2AA:97-248Ribosomal_L2_C4 → 4.1 → 4.1.1
4Abe4ujdAb1Ab:2-50Ribosomal_L29e3212 → 3212.1 → 3212.1.1
5ABe4ujdAB1AB:2-397Ribosomal_L31 → 1.1 → 1.1.7
6Ace4ujdAc1Ac:7-110Ribosomal_L7Ae301 → 301.1 → 301.1.1
7ACe4ujdAC1AC:3-297Ribosomal_L47559 → 7559.1 → 7559.1.1
8ACe4ujdAC2AC:298-366Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
9Ade4ujdAd1Ad:17-125Ribosomal_L31e259 → 259.1 → 259.1.1
10ADe4ujdAD1AD:8-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
11Aee4ujdAe1Ae:5-132Ribosomal_L32e2490 → 2490.1 → 2490.1.1
12AEe4ujdAE1AE:131-288Ribosomal_L6e4 → 4.1 → 4.1.1
13Afe4ujdAf1Af:4-110Ribosomal_L35Ae1 → 1.1 → 1.1.7
14AFe4ujdAF1AF:15-248Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
15Age4ujdAg1Ag:3-103Ribosomal_L34e377 → 377.12 → 377.12.1
16AGe4ujdAG1AG:29-263Ribosomal_L7Ae301 → 301.1 → 301.1.1
17Ahe4ujdAh1Ah:2-123Ribosomal_L29192 → 192.4 → 192.4.1
18AHe4ujdAH1AH:88-192Ribosomal_L6318 → 318.1 → 318.1.1
19AHe4ujdAH2AH:1-87Ribosomal_L6318 → 318.1 → 318.1.1
20Aie4ujdAi1Ai:6-102Ribosomal_L36e3166 → 3166.1 → 3166.1.1
21AIe4ujdAI1AI:3-214Ribosomal_L16325 → 325.1 → 325.1.5
22Aje4ujdAj1Aj:2-86Ribosomal_L37e375 → 375.1 → 375.1.1
23AJe4ujdAJ1AJ:9-178Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
24Ake4ujdAk1Ak:2-61Ribosomal_L38e896 → 896.1 → 896.1.1
25Ale4ujdAl1Al:2-51Ribosomal_L39585 → 585.1 → 585.1.1
26ALe4ujdAL1AL:16-193Ribosomal_L13e3210 → 3210.1 → 3210.1.1
27Ame4ujdAm1Am:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
28AMe4ujdAM1AM:2-141KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
29Ane4ujdAn1An:1-25Ribosomal_L416069 → 6069.1 → 6069.1.1
30ANe4ujdAN1AN:1-204Ribosomal_L15e304 → 304.109 → 304.109.1
31Aoe4ujdAo1Ao:1-106Ribosomal_L44375 → 375.1 → 375.1.1
32AOe4ujdAO1AO:5-200Ribosomal_L132490 → 2490.2 → 2490.2.1
33Ape4ujdAp1Ap:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
34APe4ujdAP1AP:2-154Ribosomal_L22218 → 218.2 → 218.2.1
35AQe4ujdAQ1AQ:5-188Ribosomal_L182490 → 2490.3 → 2490.3.1
36ARe4ujdAR1AR:57-183Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
37ARe4ujdAR2AR:1-56Ribosomal_L19e637 → 637.1 → 637.1.1
38ASe4ujdAS1AS:4-723115.1.1.03115 → 3115.1 → 3115.1.1
39ASe4ujdAS2AS:73-176Ribosomal_L18A3115 → 3115.1 → 3115.1.1
40Ate4ujdAt1At:2-131Ribosomal_L28e3209 → 3209.1 → 3209.1.1
41ATe4ujdAT1AT:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
42Aue4ujdAu1Au:1-50,Au:147-210Ribosomal_L1898 → 898.1 → 898.1.1
43Aue4ujdAu2Au:51-146Ribosomal_L12007 → 2007.25 → 2007.25.1
44AUe4ujdAU1AU:16-117Ribosomal_L22e3715 → 3715.1 → 3715.1.1
45AVe4ujdAV1AV:13-140Ribosomal_L143174 → 3174.1 → 3174.1.1
46AWe4ujdAW1AW:1-64Ribosomal_L24e377 → 377.1 → 377.1.1
47AXe4ujdAX1AX:38-156Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
48AYe4ujdAY1AY:1-128KOW, Ribosomal_L264 → 4.1 → 4.1.1
49AZe4ujdAZ1AZ:1-136KOW,Ribosomal_L27e4 → 4.1 → 4.1.1
50BBe4ujdBB1BB:1302-1433GTP_EFTU_D41 → 1.1 → 1.1.7
51BBe4ujdBB2BB:1189-1301IF-27526 → 7526.1 → 7526.1.1
52BBe4ujdBB3BB:808-1066GTP_EFTU2004 → 2004.1 → 2004.1.1
53BBe4ujdBB4BB:1067-1188GTP_EFTU_D21 → 1.1 → 1.1.7
54Cae4ujdCa1Ca:2-97Ribosomal_S26e377 → 377.1 → 377.1.1
55CAe4ujdCA1CA:2-219Ribosomal_S22007 → 2007.6 → 2007.6.1
56Cbe4ujdCb1Cb:4-83Ribosomal_S27e375 → 375.1 → 375.1.1
57CBe4ujdCB1CB:114-233Ribosomal_S3Ae230 → 230.6 → 230.6.1
58CBe4ujdCB2CB:21-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
59Cce4ujdCc1Cc:8-69Ribosomal_S28e2 → 2.1 → 2.1.1
60CCe4ujdCC2CC:202-278Ribosomal_S5_C212 → 212.1 → 212.1.1
61CCe4ujdCC1CC:57-134Ribosomal_S53274 → 3274.1 → 3274.1.1
62CCe4ujdCC3CC:135-201Ribosomal_S5330 → 330.1 → 330.1.1
63Cde4ujdCd1Cd:4-56Ribosomal_S14377 → 377.1 → 377.1.1
64CDe4ujdCD1CD:92-213Ribosomal_S3_C230 → 230.2 → 230.2.1
65CDe4ujdCD2CD:2-99KH_2327 → 327.11 → 327.11.1
66Cee4ujdCe1Ce:6-56Ribosomal_S303168 → 3168.1 → 3168.1.1
67CEe4ujdCE1CE:176-258KOW,40S_S4_C4 → 4.1 → 4.1.1
68CEe4ujdCE2CE:2-116Ribosomal_S4e,RS4NT221 → 221.1 → 221.1.2
69CEe4ujdCE3CE:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
70Cfe4ujdCf1Cf:91-151Ribosomal_S27375 → 375.1 → 375.1.1
71CFe4ujdCF1CF:17-204Ribosomal_S7167 → 167.1 → 167.1.1
72Cge4ujdCg1Cg:2-315WD405 → 5.1 → 5.1.4
73CGe4ujdCG1CG:1-232Ribosomal_S6e239 → 239.1 → 239.1.1
74CHe4ujdCH1CH:108-194Ribosomal_S7e327 → 327.18 → 327.18.1
75CHe4ujdCH2CH:4-107Ribosomal_S7e327 → 327.18 → 327.18.1
76CIe4ujdCI1CI:2-208Ribosomal_S8e3174 → 3174.1 → 3174.1.1
77CJe4ujdCJ1CJ:2-180Ribosomal_S4,S4221 → 221.1 → 221.1.2
78CKe4ujdCK1CK:2-95S10_plectin101 → 101.1 → 101.1.2
79CLe4ujdCL1CL:2-147Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
80CMe4ujdCM1CM:11-130Ribosomal_L7Ae301 → 301.1 → 301.1.1
81CNe4ujdCN1CN:83-151Ribosomal_S15616 → 616.1 → 616.1.1
82CNe4ujdCN2CN:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
83COe4ujdCO1CO:15-151Ribosomal_S112484 → 2484.1 → 2484.1.1
84CPe4ujdCP1CP:12-129Ribosomal_S19838 → 838.1 → 838.1.1
85CQe4ujdCQ1CQ:8-146Ribosomal_S9212 → 212.1 → 212.1.1
86CRe4ujdCR1CR:2-122Ribosomal_S17e101 → 101.1 → 101.1.17
87CSe4ujdCS1CS:2-143Ribosomal_S13102 → 102.2 → 102.2.1
88CTe4ujdCT1CT:2-144Ribosomal_S19e101 → 101.1 → 101.1.2
89CUe4ujdCU1CU:18-118Ribosomal_S10304 → 304.44 → 304.44.1
90CVe4ujdCV1CV:1-83Ribosomal_S21e3167 → 3167.1 → 3167.1.1
91CWe4ujdCW1CW:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
92CWe4ujdCW2CW:2-67Ribosomal_S8320 → 320.2 → 320.2.1
93CXe4ujdCX1CX:7-140Ribosom_S12_S232 → 2.1 → 2.1.1
94CYe4ujdCY1CY:4-125Ribosomal_S24e304 → 304.109 → 304.109.1
95CZe4ujdCZ1CZ:40-115Ribosomal_S25101 → 101.1 → 101.1.2

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors