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PDB 4V5J

X-RAY DIFFRACTION3.10 Å118 chains124 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AB30S RIBOSOMAL PROTEIN S2view chain
1 domain
Chain AC30S RIBOSOMAL PROTEIN S3view chain
2 domains
Chain AD30S RIBOSOMAL PROTEIN S4view chain
1 domain
Chain AE30S RIBOSOMAL PROTEIN S5view chain
2 domains
Chain AF30S RIBOSOMAL PROTEIN S6view chain
1 domain
Chain AG30S RIBOSOMAL PROTEIN S7view chain
1 domain
Chain AH30S RIBOSOMAL PROTEIN S8view chain
2 domains
Chain AI30S RIBOSOMAL PROTEIN S9view chain
1 domain
Chain AJ30S RIBOSOMAL PROTEIN S10view chain
1 domain
Chain AK30S RIBOSOMAL PROTEIN S11view chain
1 domain
Chain AL30S RIBOSOMAL PROTEIN S12view chain
1 domain
Chain AM30S RIBOSOMAL PROTEIN S13view chain
1 domain
Chain AN30S RIBOSOMAL PROTEIN S14 TYPE Zview chain
1 domain
Chain AO30S RIBOSOMAL PROTEIN S15view chain
1 domain
Chain AP30S RIBOSOMAL PROTEIN S16view chain
1 domain
Chain AQ30S RIBOSOMAL PROTEIN S17view chain
1 domain
Chain AR30S RIBOSOMAL PROTEIN S18view chain
1 domain
Chain AS30S RIBOSOMAL PROTEIN S19view chain
1 domain
Chain AT30S RIBOSOMAL PROTEIN S20view chain
1 domain
Chain B050S RIBOSOMAL PROTEIN L27view chain
1 domain
Chain B150S RIBOSOMAL PROTEIN L28view chain
1 domain
Chain B250S RIBOSOMAL PROTEIN L29view chain
1 domain
Chain B350S RIBOSOMAL PROTEIN L30view chain
1 domain
Chain B450S RIBOSOMAL PROTEIN L31view chain
1 domain
Chain B550S RIBOSOMAL PROTEIN L32view chain
1 domain
Chain B650S RIBOSOMAL PROTEIN L33view chain
1 domain
Chain B750S RIBOSOMAL PROTEIN L34view chain
1 domain
Chain B850S RIBOSOMAL PROTEIN L35view chain
1 domain
Chain B950S RIBOSOMAL PROTEIN L36view chain
1 domain
Chain BC50S RIBOSOMAL PROTEIN L1view chain
1 domain
Chain BD50S RIBOSOMAL PROTEIN L2view chain
2 domains
Chain BE50S RIBOSOMAL PROTEIN L3view chain
1 domain
Chain BF50S RIBOSOMAL PROTEIN L4view chain
1 domain
Chain BG50S RIBOSOMAL PROTEIN L5view chain
1 domain
Chain BH50S RIBOSOMAL PROTEIN L6view chain
2 domains
Chain BI50S RIBOSOMAL PROTEIN L9view chain
2 domains
Chain BK50S RIBOSOMAL PROTEIN L11view chain
2 domains
Chain BN50S RIBOSOMAL PROTEIN L13view chain
1 domain
Chain BO50S RIBOSOMAL PROTEIN L14view chain
1 domain
Chain BP50S RIBOSOMAL PROTEIN L15view chain
1 domain
Chain BQ50S RIBOSOMAL PROTEIN L16view chain
1 domain
Chain BR50S RIBOSOMAL PROTEIN L17view chain
1 domain
Chain BS50S RIBOSOMAL PROTEIN L18view chain
1 domain
Chain BT50S RIBOSOMAL PROTEIN L19view chain
1 domain
Chain BU50S RIBOSOMAL PROTEIN L20view chain
1 domain
Chain BV50S RIBOSOMAL PROTEIN L21view chain
1 domain
Chain BW50S RIBOSOMAL PROTEIN L22view chain
1 domain
Chain BX50S RIBOSOMAL PROTEIN L23view chain
1 domain
Chain BY50S RIBOSOMAL PROTEIN L24view chain
1 domain
Chain BZ50S RIBOSOMAL PROTEIN L25view chain
2 domains
Chain CB30S RIBOSOMAL PROTEIN S2view chain
1 domain
Chain CC30S RIBOSOMAL PROTEIN S3view chain
2 domains
Chain CD30S RIBOSOMAL PROTEIN S4view chain
1 domain
Chain CE30S RIBOSOMAL PROTEIN S5view chain
2 domains
Chain CF30S RIBOSOMAL PROTEIN S6view chain
1 domain
Chain CG30S RIBOSOMAL PROTEIN S7view chain
1 domain
Chain CH30S RIBOSOMAL PROTEIN S8view chain
2 domains
Chain CI30S RIBOSOMAL PROTEIN S9view chain
1 domain
Chain CJ30S RIBOSOMAL PROTEIN S10view chain
1 domain
Chain CK30S RIBOSOMAL PROTEIN S11view chain
1 domain
Chain CL30S RIBOSOMAL PROTEIN S12view chain
1 domain
Chain CM30S RIBOSOMAL PROTEIN S13view chain
1 domain
Chain CN30S RIBOSOMAL PROTEIN S14 TYPE Zview chain
1 domain
Chain CO30S RIBOSOMAL PROTEIN S15view chain
1 domain
Chain CP30S RIBOSOMAL PROTEIN S16view chain
1 domain
Chain CQ30S RIBOSOMAL PROTEIN S17view chain
1 domain
Chain CR30S RIBOSOMAL PROTEIN S18view chain
1 domain
Chain CS30S RIBOSOMAL PROTEIN S19view chain
1 domain
Chain CT30S RIBOSOMAL PROTEIN S20view chain
1 domain
Chain D050S RIBOSOMAL PROTEIN L27view chain
1 domain
Chain D150S RIBOSOMAL PROTEIN L28view chain
1 domain
Chain D250S RIBOSOMAL PROTEIN L29view chain
1 domain
Chain D350S RIBOSOMAL PROTEIN L30view chain
1 domain
Chain D450S RIBOSOMAL PROTEIN L31view chain
1 domain
Chain D550S RIBOSOMAL PROTEIN L32view chain
1 domain
Chain D650S RIBOSOMAL PROTEIN L33view chain
1 domain
Chain D750S RIBOSOMAL PROTEIN L34view chain
1 domain
Chain D850S RIBOSOMAL PROTEIN L35view chain
1 domain
Chain D950S RIBOSOMAL PROTEIN L36view chain
1 domain
Chain DC50S RIBOSOMAL PROTEIN L1view chain
1 domain
Chain DD50S RIBOSOMAL PROTEIN L2view chain
2 domains
Chain DE50S RIBOSOMAL PROTEIN L3view chain
1 domain
Chain DF50S RIBOSOMAL PROTEIN L4view chain
1 domain
Chain DG50S RIBOSOMAL PROTEIN L5view chain
1 domain
Chain DH50S RIBOSOMAL PROTEIN L6view chain
2 domains
Chain DI50S RIBOSOMAL PROTEIN L9view chain
2 domains
Chain DK50S RIBOSOMAL PROTEIN L11view chain
2 domains
Chain DN50S RIBOSOMAL PROTEIN L13view chain
1 domain
Chain DO50S RIBOSOMAL PROTEIN L14view chain
1 domain
Chain DP50S RIBOSOMAL PROTEIN L15view chain
1 domain
Chain DQ50S RIBOSOMAL PROTEIN L16view chain
1 domain
Chain DR50S RIBOSOMAL PROTEIN L17view chain
1 domain
Chain DS50S RIBOSOMAL PROTEIN L18view chain
1 domain
Chain DT50S RIBOSOMAL PROTEIN L19view chain
1 domain
Chain DU50S RIBOSOMAL PROTEIN L20view chain
1 domain
Chain DV50S RIBOSOMAL PROTEIN L21view chain
1 domain
Chain DW50S RIBOSOMAL PROTEIN L22view chain
1 domain
Chain DX50S RIBOSOMAL PROTEIN L23view chain
1 domain
Chain DY50S RIBOSOMAL PROTEIN L24view chain
1 domain
Chain DZ50S RIBOSOMAL PROTEIN L25view chain
2 domains

All Domains (124)

#ChainDomain IDRangeFamilyClassification
1ABe4v5jAB1AB:7-127,AB:157-241Ribosomal_S22007 → 2007.6 → 2007.6.1
2ACe4v5jAC1AC:107-208Ribosomal_S3_C230 → 230.2 → 230.2.1
3ACe4v5jAC2AC:2-106KH_2327 → 327.11 → 327.11.1
4ADe4v5jAD1AD:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
5AEe4v5jAE1AE:5-73Ribosomal_S5330 → 330.1 → 330.1.1
6AEe4v5jAE2AE:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
7AFe4v5jAF1AF:1-101Ribosomal_S6304 → 304.12 → 304.12.1
8AGe4v5jAG1AG:2-156Ribosomal_S7167 → 167.1 → 167.1.1
9AHe4v5jAH1AH:1-66Ribosomal_S8320 → 320.2 → 320.2.1
10AHe4v5jAH2AH:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
11AIe4v5jAI1AI:2-128Ribosomal_S9212 → 212.1 → 212.1.1
12AJe4v5jAJ1AJ:3-101Ribosomal_S10304 → 304.44 → 304.44.1
13AKe4v5jAK1AK:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
14ALe4v5jAL1AL:5-129Ribosom_S12_S232 → 2.1 → 2.1.1
15AMe4v5jAM1AM:2-126Ribosomal_S13102 → 102.2 → 102.2.1
16ANe4v5jAN1AN:2-61Ribosomal_S14377 → 377.1 → 377.1.1
17AOe4v5jAO1AO:2-89Ribosomal_S15616 → 616.1 → 616.1.1
18APe4v5jAP1AP:1-84Ribosomal_S16837 → 837.1 → 837.1.1
19AQe4v5jAQ1AQ:2-78Ribosomal_S172 → 2.1 → 2.1.1
20ARe4v5jAR1AR:19-88Ribosomal_S18101 → 101.1 → 101.1.1
21ASe4v5jAS1AS:4-82Ribosomal_S19838 → 838.1 → 838.1.1
22ATe4v5jAT1AT:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
23AYe4v5jAY1AY:214-300RF-1330 → 330.3 → 330.3.1
24AYe4v5jAY2AY:6-108PCRF4006 → 4006.1 → 4006.1.1
25AYe4v5jAY3AY:301-356330.3.1.0330 → 330.3 → 330.3.1
26AYe4v5jAY4AY:109-213PCRF304 → 304.116 → 304.116.1
27B0e4v5jB01B0:3-85Ribosomal_L27325 → 325.1 → 325.1.8
28B1e4v5jB11B1:3-96Ribosomal_L284232 → 4232.1 → 4232.1.1
29B2e4v5jB21B2:2-72Ribosomal_L29192 → 192.4 → 192.4.1
30B3e4v5jB31B3:1-60Ribosomal_L30887 → 887.1 → 887.1.1
31B4e4v5jB41B4:10-40Ribosomal_L314987 → 4987.1 → 4987.1.1
32B5e4v5jB51B5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
33B6e4v5jB61B6:9-53Ribosomal_L33375 → 375.1 → 375.1.1
34B7e4v5jB71B7:1-49Ribosomal_L343074 → 3074.1 → 3074.1.1
35B8e4v5jB81B8:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
36B9e4v5jB91B9:2-37Ribosomal_L36919 → 919.1 → 919.1.1
37BCe4v5jBC1BC:2-57,BC:166-229Ribosomal_L1898 → 898.1 → 898.1.1
38BDe4v5jBD1BD:127-273Ribosomal_L2_C4 → 4.1 → 4.1.1
39BDe4v5jBD2BD:2-126Ribosomal_L22 → 2.1 → 2.1.1
40BEe4v5jBE1BE:1-205Ribosomal_L31 → 1.1 → 1.1.7
41BFe4v5jBF1BF:1-208Ribosomal_L47559 → 7559.1 → 7559.1.1
42BGe4v5jBG1BG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
43BHe4v5jBH1BH:83-171Ribosomal_L6318 → 318.1 → 318.1.1
44BHe4v5jBH2BH:12-82Ribosomal_L6318 → 318.1 → 318.1.1
45BIe4v5jBI1BI:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
46BIe4v5jBI2BI:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
47BKe4v5jBK1BK:1-72Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
48BKe4v5jBK2BK:73-141Ribosomal_L11101 → 101.1 → 101.1.16
49BNe4v5jBN1BN:1-139Ribosomal_L132490 → 2490.2 → 2490.2.1
50BOe4v5jBO1BO:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
51BPe4v5jBP1BP:5-150Ribosomal_L27A, Ribosomal_uL15_N2490 → 2490.3 → 2490.3.1
52BQe4v5jBQ1BQ:1-141Ribosomal_L16325 → 325.1 → 325.1.5
53BRe4v5jBR1BR:2-118Ribosomal_L17218 → 218.3 → 218.3.1
54BSe4v5jBS1BS:11-109Ribosomal_L18p2484 → 2484.1 → 2484.1.1
55BTe4v5jBT1BT:1-117Ribosomal_L194 → 4.1 → 4.1.1
56BUe4v5jBU1BU:2-118Ribosomal_L20143 → 143.2 → 143.2.1
57BVe4v5jBV1BV:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
58BWe4v5jBW1BW:1-113Ribosomal_L22218 → 218.2 → 218.2.1
59BXe4v5jBX1BX:3-95Ribosomal_L23304 → 304.109 → 304.109.1
60BYe4v5jBY1BY:2-102KOW,ribosomal_L244 → 4.1 → 4.1.1
61BZe4v5jBZ1BZ:93-187Ribosomal_TL5_C240 → 240.1 → 240.1.1
62BZe4v5jBZ2BZ:3-92Ribosomal_L25p239 → 239.1 → 239.1.1
63CBe4v5jCB1CB:7-127,CB:157-241Ribosomal_S22007 → 2007.6 → 2007.6.1
64CCe4v5jCC1CC:107-208Ribosomal_S3_C230 → 230.2 → 230.2.1
65CCe4v5jCC2CC:2-106KH_2327 → 327.11 → 327.11.1
66CDe4v5jCD1CD:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
67CEe4v5jCE1CE:5-73Ribosomal_S5330 → 330.1 → 330.1.1
68CEe4v5jCE2CE:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
69CFe4v5jCF1CF:1-101Ribosomal_S6304 → 304.12 → 304.12.1
70CGe4v5jCG1CG:2-156Ribosomal_S7167 → 167.1 → 167.1.1
71CHe4v5jCH1CH:1-66Ribosomal_S8320 → 320.2 → 320.2.1
72CHe4v5jCH2CH:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
73CIe4v5jCI1CI:2-128Ribosomal_S9212 → 212.1 → 212.1.1
74CJe4v5jCJ1CJ:3-101Ribosomal_S10304 → 304.44 → 304.44.1
75CKe4v5jCK1CK:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
76CLe4v5jCL1CL:5-129Ribosom_S12_S232 → 2.1 → 2.1.1
77CMe4v5jCM1CM:2-126Ribosomal_S13102 → 102.2 → 102.2.1
78CNe4v5jCN1CN:2-61Ribosomal_S14377 → 377.1 → 377.1.1
79COe4v5jCO1CO:2-89Ribosomal_S15616 → 616.1 → 616.1.1
80CPe4v5jCP1CP:1-84Ribosomal_S16837 → 837.1 → 837.1.1
81CQe4v5jCQ1CQ:2-78Ribosomal_S172 → 2.1 → 2.1.1
82CRe4v5jCR1CR:19-88Ribosomal_S18101 → 101.1 → 101.1.1
83CSe4v5jCS1CS:4-82Ribosomal_S19838 → 838.1 → 838.1.1
84CTe4v5jCT1CT:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
85CYe4v5jCY1CY:214-300RF-1330 → 330.3 → 330.3.1
86CYe4v5jCY2CY:6-108PCRF4006 → 4006.1 → 4006.1.1
87CYe4v5jCY3CY:301-356330.3.1.0330 → 330.3 → 330.3.1
88CYe4v5jCY4CY:109-213PCRF304 → 304.116 → 304.116.1
89D0e4v5jD01D0:3-85Ribosomal_L27325 → 325.1 → 325.1.8
90D1e4v5jD11D1:3-96Ribosomal_L284232 → 4232.1 → 4232.1.1
91D2e4v5jD21D2:2-72Ribosomal_L29192 → 192.4 → 192.4.1
92D3e4v5jD31D3:1-60Ribosomal_L30887 → 887.1 → 887.1.1
93D4e4v5jD41D4:10-40Ribosomal_L314987 → 4987.1 → 4987.1.1
94D5e4v5jD51D5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
95D6e4v5jD61D6:9-53Ribosomal_L33375 → 375.1 → 375.1.1
96D7e4v5jD71D7:1-49Ribosomal_L343074 → 3074.1 → 3074.1.1
97D8e4v5jD81D8:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
98D9e4v5jD91D9:2-37Ribosomal_L36919 → 919.1 → 919.1.1
99DCe4v5jDC1DC:2-57,DC:166-229Ribosomal_L1898 → 898.1 → 898.1.1
100DDe4v5jDD1DD:127-273Ribosomal_L2_C4 → 4.1 → 4.1.1
101DDe4v5jDD2DD:2-126Ribosomal_L22 → 2.1 → 2.1.1
102DEe4v5jDE1DE:1-205Ribosomal_L31 → 1.1 → 1.1.7
103DFe4v5jDF1DF:1-208Ribosomal_L47559 → 7559.1 → 7559.1.1
104DGe4v5jDG1DG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
105DHe4v5jDH1DH:83-171Ribosomal_L6318 → 318.1 → 318.1.1
106DHe4v5jDH2DH:12-82Ribosomal_L6318 → 318.1 → 318.1.1
107DIe4v5jDI1DI:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
108DIe4v5jDI2DI:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
109DKe4v5jDK1DK:1-72Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
110DKe4v5jDK2DK:73-141Ribosomal_L11101 → 101.1 → 101.1.16
111DNe4v5jDN1DN:1-139Ribosomal_L132490 → 2490.2 → 2490.2.1
112DOe4v5jDO1DO:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
113DPe4v5jDP1DP:5-150Ribosomal_L27A, Ribosomal_uL15_N2490 → 2490.3 → 2490.3.1
114DQe4v5jDQ1DQ:1-141Ribosomal_L16325 → 325.1 → 325.1.5
115DRe4v5jDR1DR:2-118Ribosomal_L17218 → 218.3 → 218.3.1
116DSe4v5jDS1DS:11-109Ribosomal_L18p2484 → 2484.1 → 2484.1.1
117DTe4v5jDT1DT:1-117Ribosomal_L194 → 4.1 → 4.1.1
118DUe4v5jDU1DU:2-118Ribosomal_L20143 → 143.2 → 143.2.1
119DVe4v5jDV1DV:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
120DWe4v5jDW1DW:1-113Ribosomal_L22218 → 218.2 → 218.2.1
121DXe4v5jDX1DX:3-95Ribosomal_L23304 → 304.109 → 304.109.1
122DYe4v5jDY1DY:2-102KOW,ribosomal_L244 → 4.1 → 4.1.1
123DZe4v5jDZ1DZ:93-187Ribosomal_TL5_C240 → 240.1 → 240.1.1
124DZe4v5jDZ2DZ:3-92Ribosomal_L25p239 → 239.1 → 239.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors