ECODEvolutionary Classification of Protein Domains

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PDB 4WWK

X-RAY DIFFRACTION3.10 Å4 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ATCR Alpha Chain-TRAV12-3view chain

2 domains

e4wwkA1(A:5-130)e4wwkA2(A:129-207)

Chain BTCR Beta Chain-TRBV6-5view chain

2 domains

e4wwkB1(B:3-129)e4wwkB2(B:130-255)

Chain CAntigen-presenting glycoprotein CD1dview chain

2 domains

e4wwkC1(C:184-277)e4wwkC2(C:8-183)

Chain DBeta-2-microglobulinview chain

1 domain

e4wwkD1(D:1-99)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4wwkA1	A:5-130	V-set	11 → 11.1 → 11.1.1
2	A	e4wwkA2	A:129-207	DUF1968	11 → 11.1 → 11.1.1
3	B	e4wwkB1	B:3-129	V-set	11 → 11.1 → 11.1.1
4	B	e4wwkB2	B:130-255	C1-set	11 → 11.1 → 11.1.1
5	C	e4wwkC1	C:184-277	C1-set	11 → 11.1 → 11.1.1
6	C	e4wwkC2	C:8-183	MHC_I_3	233 → 233.1 → 233.1.1
7	D	e4wwkD1	D:1-99	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors