ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 4Y4F

X-RAY DIFFRACTION3.19 Å8 chains14 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain AAntigen-presenting glycoprotein CD1d1view chain

2 domains

e4y4fA1(A:186-279)e4y4fA2(A:7-185)

Chain BBeta-2-microglobulinview chain

1 domain

e4y4fB1(B:2-97)

Chain CChimeric TCR Valpha14/Jalpha18 chain (mouse variable domain/ human constant domain)view chain

2 domains

e4y4fC1(C:116-204)e4y4fC2(C:2-115)

Chain DChimeric TCR Vbeta8.2 chain (mouse variable domain, human constant domain)view chain

2 domains

e4y4fD1(D:116-240)e4y4fD2(D:2-115)

Chain EAntigen-presenting glycoprotein CD1d1view chain

2 domains

e4y4fE1(E:7-185)e4y4fE2(E:186-279)

Chain FBeta-2-microglobulinview chain

1 domain

e4y4fF1(F:2-97)

Chain GChimeric TCR Valpha14/Jalpha18 chain (mouse variable domain/ human constant domain)view chain

2 domains

e4y4fG1(G:2-115)e4y4fG2(G:116-204)

Chain HChimeric TCR Vbeta8.2 chain (mouse variable domain, human constant domain)view chain

2 domains

e4y4fH1(H:2-115)e4y4fH2(H:116-240)

All Domains (14)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4y4fA1	A:186-279	C1-set	11 → 11.1 → 11.1.1
2	A	e4y4fA2	A:7-185	MHC_I_3	233 → 233.1 → 233.1.1
3	B	e4y4fB1	B:2-97	C1-set	11 → 11.1 → 11.1.1
4	C	e4y4fC1	C:116-204	DUF1968	11 → 11.1 → 11.1.1
5	C	e4y4fC2	C:2-115	V-set	11 → 11.1 → 11.1.1
6	D	e4y4fD1	D:116-240	C1-set	11 → 11.1 → 11.1.1
7	D	e4y4fD2	D:2-115	V-set	11 → 11.1 → 11.1.1
8	E	e4y4fE1	E:7-185	MHC_I_3	233 → 233.1 → 233.1.1
9	E	e4y4fE2	E:186-279	C1-set	11 → 11.1 → 11.1.1
10	F	e4y4fF1	F:2-97	C1-set	11 → 11.1 → 11.1.1
11	G	e4y4fG1	G:2-115	V-set	11 → 11.1 → 11.1.1
12	G	e4y4fG2	G:116-204	DUF1968	11 → 11.1 → 11.1.1
13	H	e4y4fH1	H:2-115	V-set	11 → 11.1 → 11.1.1
14	H	e4y4fH2	H:116-240	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors