ECODEvolutionary Classification of Protein Domains

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PDB 4Y8M

X-RAY DIFFRACTION2.80 Å28 chains28 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aProteasome subunit beta type-7view chain

1 domain

e4y8ma1(a:1-222)

Chain AProteasome subunit alpha type-2view chain

1 domain

e4y8mA1(A:1-250)

Chain bProteasome subunit beta type-1view chain

1 domain

e4y8mb1(b:1-196)

Chain BProteasome subunit alpha type-3view chain

1 domain

e4y8mB1(B:1-244)

Chain CProteasome subunit alpha type-4view chain

1 domain

e4y8mC1(C:1-240)

Chain DProteasome subunit alpha type-5view chain

1 domain

e4y8mD1(D:1-242)

Chain EProteasome subunit alpha type-6view chain

1 domain

e4y8mE1(E:3-233)

Chain FProbable proteasome subunit alpha type-7view chain

1 domain

e4y8mF1(F:2-244)

Chain GProteasome subunit alpha type-1view chain

1 domain

e4y8mG1(G:2-242)

Chain HProteasome subunit beta type-2view chain

1 domain

e4y8mH1(H:1-226)

Chain IProteasome subunit beta type-3view chain

1 domain

e4y8mI1(I:1-204)

Chain JProteasome subunit beta type-4view chain

1 domain

e4y8mJ1(J:1-195)

Chain KProteasome subunit beta type-5view chain

1 domain

e4y8mK1(K:1-212)

Chain LProteasome subunit beta type-6view chain

1 domain

e4y8mL1(L:1-222)

Chain MProteasome subunit beta type-7view chain

1 domain

e4y8mM1(M:1-222)

Chain NProteasome subunit beta type-1view chain

1 domain

e4y8mN1(N:1-196)

Chain OProteasome subunit alpha type-2view chain

1 domain

e4y8mO1(O:1-250)

Chain PProteasome subunit alpha type-3view chain

1 domain

e4y8mP1(P:1-244)

Chain QProteasome subunit alpha type-4view chain

1 domain

e4y8mQ1(Q:1-240)

Chain RProteasome subunit alpha type-5view chain

1 domain

e4y8mR1(R:1-242)

Chain SProteasome subunit alpha type-6view chain

1 domain

e4y8mS1(S:3-233)

Chain TProbable proteasome subunit alpha type-7view chain

1 domain

e4y8mT1(T:2-244)

Chain UProteasome subunit alpha type-1view chain

1 domain

e4y8mU1(U:2-242)

Chain VProteasome subunit beta type-2view chain

1 domain

e4y8mV1(V:1-226)

Chain WProteasome subunit beta type-3view chain

1 domain

e4y8mW1(W:1-204)

Chain XProteasome subunit beta type-4view chain

1 domain

e4y8mX1(X:1-195)

Chain YProteasome subunit beta type-5view chain

1 domain

e4y8mY1(Y:1-212)

Chain ZProteasome subunit beta type-6view chain

1 domain

e4y8mZ1(Z:1-222)

All Domains (28)

#	Chain	Domain ID	Range	Family	Classification
1	a	e4y8ma1	a:1-222	Proteasome	210 → 210.1 → 210.1.1
2	A	e4y8mA1	A:1-250	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
3	b	e4y8mb1	b:1-196	Proteasome	210 → 210.1 → 210.1.1
4	B	e4y8mB1	B:1-244	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
5	C	e4y8mC1	C:1-240	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
6	D	e4y8mD1	D:1-242	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
7	E	e4y8mE1	E:3-233	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
8	F	e4y8mF1	F:2-244	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
9	G	e4y8mG1	G:2-242	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
10	H	e4y8mH1	H:1-226	Proteasome,Pr_beta_C	210 → 210.1 → 210.1.1
11	I	e4y8mI1	I:1-204	Proteasome	210 → 210.1 → 210.1.1
12	J	e4y8mJ1	J:1-195	Proteasome	210 → 210.1 → 210.1.1
13	K	e4y8mK1	K:1-212	Proteasome	210 → 210.1 → 210.1.1
14	L	e4y8mL1	L:1-222	Proteasome	210 → 210.1 → 210.1.1
15	M	e4y8mM1	M:1-222	Proteasome	210 → 210.1 → 210.1.1
16	N	e4y8mN1	N:1-196	Proteasome	210 → 210.1 → 210.1.1
17	O	e4y8mO1	O:1-250	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
18	P	e4y8mP1	P:1-244	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
19	Q	e4y8mQ1	Q:1-240	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
20	R	e4y8mR1	R:1-242	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
21	S	e4y8mS1	S:3-233	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
22	T	e4y8mT1	T:2-244	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
23	U	e4y8mU1	U:2-242	Proteasome,Proteasome_A_N	210 → 210.1 → 210.1.1
24	V	e4y8mV1	V:1-226	Proteasome,Pr_beta_C	210 → 210.1 → 210.1.1
25	W	e4y8mW1	W:1-204	Proteasome	210 → 210.1 → 210.1.1
26	X	e4y8mX1	X:1-195	Proteasome	210 → 210.1 → 210.1.1
27	Y	e4y8mY1	Y:1-212	Proteasome	210 → 210.1 → 210.1.1
28	Z	e4y8mZ1	Z:1-222	Proteasome	210 → 210.1 → 210.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors