ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 4YBQ

X-RAY DIFFRACTION3.27 Å6 chains8 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain ASolute carrier family 2, facilitated glucose transporter member 5view chain

2 domains

e4ybqA1(A:256-480)e4ybqA2(A:7-38,A:61-255)

Chain BSolute carrier family 2, facilitated glucose transporter member 5view chain

2 domains

e4ybqB1(B:7-255)e4ybqB2(B:256-480)

Chain Cantibody Fv fragment light chainview chain

1 domain

e4ybqC1(C:1-115)

Chain Dantibody Fv fragment heavy chainview chain

1 domain

e4ybqD1(D:1-120)

Chain Eantibody Fv fragment light chainview chain

1 domain

e4ybqE1(E:1-115)

Chain Fantibody Fv fragment heavy chainview chain

1 domain

e4ybqF1(F:2-120)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4ybqA1	A:256-480	Sugar_tr	5050 → 5050.1 → 5050.1.1
2	A	e4ybqA2	A:7-38,A:61-255	Sugar_tr	5050 → 5050.1 → 5050.1.1
3	B	e4ybqB1	B:7-255	Sugar_tr	5050 → 5050.1 → 5050.1.1
4	B	e4ybqB2	B:256-480	Sugar_tr	5050 → 5050.1 → 5050.1.1
5	C	e4ybqC1	C:1-115	V-set	11 → 11.1 → 11.1.1
6	D	e4ybqD1	D:1-120	V-set	11 → 11.1 → 11.1.1
7	E	e4ybqE1	E:1-115	V-set	11 → 11.1 → 11.1.1
8	F	e4ybqF1	F:2-120	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors