ECODEvolutionary Classification of Protein Domains

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PDB 4YGD

X-RAY DIFFRACTION2.50 Å8 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AProtein ERGIC-53view chain

1 domain

e4ygdA1(A:42-268)

Chain BMultiple coagulation factor deficiency protein 2view chain

1 domain

e4ygdB1(B:67-145)

Chain CProtein ERGIC-53view chain

1 domain

e4ygdC1(C:42-268)

Chain DMultiple coagulation factor deficiency protein 2view chain

1 domain

e4ygdD1(D:69-143)

Chain EProtein ERGIC-53view chain

1 domain

e4ygdE1(E:42-268)

Chain FMultiple coagulation factor deficiency protein 2view chain

1 domain

e4ygdF1(F:67-142)

Chain GProtein ERGIC-53view chain

1 domain

e4ygdG1(G:42-268)

Chain HMultiple coagulation factor deficiency protein 2view chain

1 domain

e4ygdH1(H:67-145)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4ygdA1	A:42-268	Lectin_leg-like	10 → 10.1 → 10.1.1
2	B	e4ygdB1	B:67-145	EF-hand_7	108 → 108.1 → 108.1.1
3	C	e4ygdC1	C:42-268	Lectin_leg-like	10 → 10.1 → 10.1.1
4	D	e4ygdD1	D:69-143	EF-hand_7	108 → 108.1 → 108.1.1
5	E	e4ygdE1	E:42-268	Lectin_leg-like	10 → 10.1 → 10.1.1
6	F	e4ygdF1	F:67-142	EF-hand_7	108 → 108.1 → 108.1.1
7	G	e4ygdG1	G:42-268	Lectin_leg-like	10 → 10.1 → 10.1.1
8	H	e4ygdH1	H:67-145	EF-hand_7	108 → 108.1 → 108.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors