ECODEvolutionary Classification of Protein Domains

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PDB 4YVS

X-RAY DIFFRACTION3.65 Å15 chains15 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACapsid protein VP1view chain

1 domain

e4yvsA1(A:72-297)

Chain BCapsid protein VP3view chain

1 domain

e4yvsB1(B:1-237)

Chain CCapsid protein VP0view chain

1 domain

e4yvsC1(C:19-249)

Chain DCapsid protein VP1view chain

1 domain

e4yvsD1(D:72-297)

Chain ECapsid protein VP3view chain

1 domain

e4yvsE1(E:1-237)

Chain FCapsid protein VP0view chain

1 domain

e4yvsF1(F:19-249)

Chain GCapsid protein VP1view chain

1 domain

e4yvsG1(G:72-297)

Chain HCapsid protein VP3view chain

1 domain

e4yvsH1(H:1-237)

Chain ICapsid protein VP0view chain

1 domain

e4yvsI1(I:19-249)

Chain JCapsid protein VP1view chain

1 domain

e4yvsJ1(J:72-297)

Chain KCapsid protein VP3view chain

1 domain

e4yvsK1(K:1-237)

Chain LCapsid protein VP0view chain

1 domain

e4yvsL1(L:19-249)

Chain MCapsid protein VP1view chain

1 domain

e4yvsM1(M:72-297)

Chain NCapsid protein VP3view chain

1 domain

e4yvsN1(N:1-237)

Chain OCapsid protein VP0view chain

1 domain

e4yvsO1(O:19-249)

All Domains (15)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4yvsA1	A:72-297	Rhv_5	10 → 10.2 → 10.2.1
2	B	e4yvsB1	B:1-237	Rhv	10 → 10.2 → 10.2.1
3	C	e4yvsC1	C:19-249	Rhv	10 → 10.2 → 10.2.1
4	D	e4yvsD1	D:72-297	Rhv_5	10 → 10.2 → 10.2.1
5	E	e4yvsE1	E:1-237	Rhv	10 → 10.2 → 10.2.1
6	F	e4yvsF1	F:19-249	Rhv	10 → 10.2 → 10.2.1
7	G	e4yvsG1	G:72-297	Rhv_5	10 → 10.2 → 10.2.1
8	H	e4yvsH1	H:1-237	Rhv	10 → 10.2 → 10.2.1
9	I	e4yvsI1	I:19-249	Rhv	10 → 10.2 → 10.2.1
10	J	e4yvsJ1	J:72-297	Rhv_5	10 → 10.2 → 10.2.1
11	K	e4yvsK1	K:1-237	Rhv	10 → 10.2 → 10.2.1
12	L	e4yvsL1	L:19-249	Rhv	10 → 10.2 → 10.2.1
13	M	e4yvsM1	M:72-297	Rhv_5	10 → 10.2 → 10.2.1
14	N	e4yvsN1	N:1-237	Rhv	10 → 10.2 → 10.2.1
15	O	e4yvsO1	O:19-249	Rhv	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors