ECODEvolutionary Classification of Protein Domains

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PDB 4YVW

X-RAY DIFFRACTION3.80 Å15 chains15 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACapsid protein VP1view chain

1 domain

e4yvwA1(A:72-296)

Chain BCapsid protein VP3view chain

1 domain

e4yvwB1(B:1-236)

Chain CCapsid protein VP0view chain

1 domain

e4yvwC1(C:16-250)

Chain DCapsid protein VP1view chain

1 domain

e4yvwD1(D:72-296)

Chain ECapsid protein VP1view chain

1 domain

e4yvwE1(E:72-296)

Chain FCapsid protein VP3view chain

1 domain

e4yvwF1(F:1-236)

Chain GCapsid protein VP0view chain

1 domain

e4yvwG1(G:16-250)

Chain HCapsid protein VP3view chain

1 domain

e4yvwH1(H:1-236)

Chain ICapsid protein VP0view chain

1 domain

e4yvwI1(I:16-250)

Chain JCapsid protein VP1view chain

1 domain

e4yvwJ1(J:72-296)

Chain KCapsid protein VP3view chain

1 domain

e4yvwK1(K:1-236)

Chain LCapsid protein VP0view chain

1 domain

e4yvwL1(L:16-250)

Chain MCapsid protein VP1view chain

1 domain

e4yvwM1(M:72-296)

Chain NCapsid protein VP3view chain

1 domain

e4yvwN1(N:1-236)

Chain OCapsid protein VP0view chain

1 domain

e4yvwO1(O:16-250)

All Domains (15)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4yvwA1	A:72-296	Rhv_5	10 → 10.2 → 10.2.1
2	B	e4yvwB1	B:1-236	Rhv	10 → 10.2 → 10.2.1
3	C	e4yvwC1	C:16-250	Rhv	10 → 10.2 → 10.2.1
4	D	e4yvwD1	D:72-296	Rhv_5	10 → 10.2 → 10.2.1
5	E	e4yvwE1	E:72-296	Rhv_5	10 → 10.2 → 10.2.1
6	F	e4yvwF1	F:1-236	Rhv	10 → 10.2 → 10.2.1
7	G	e4yvwG1	G:16-250	Rhv	10 → 10.2 → 10.2.1
8	H	e4yvwH1	H:1-236	Rhv	10 → 10.2 → 10.2.1
9	I	e4yvwI1	I:16-250	Rhv	10 → 10.2 → 10.2.1
10	J	e4yvwJ1	J:72-296	Rhv_5	10 → 10.2 → 10.2.1
11	K	e4yvwK1	K:1-236	Rhv	10 → 10.2 → 10.2.1
12	L	e4yvwL1	L:16-250	Rhv	10 → 10.2 → 10.2.1
13	M	e4yvwM1	M:72-296	Rhv_5	10 → 10.2 → 10.2.1
14	N	e4yvwN1	N:1-236	Rhv	10 → 10.2 → 10.2.1
15	O	e4yvwO1	O:16-250	Rhv	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors