ECODEvolutionary Classification of Protein Domains

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PDB 5BO4

X-RAY DIFFRACTION2.90 Å18 chains24 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ASuppressor of cytokine signaling 2view chain

2 domains

e5bo4A1(A:31-134)e5bo4A2(A:149-198)

Chain BTranscription elongation factor B polypeptide 2view chain

1 domain

e5bo4B1(B:2-104)

Chain CTranscription elongation factor B polypeptide 1view chain

1 domain

e5bo4C1(C:16-112)

Chain DSuppressor of cytokine signaling 2view chain

2 domains

e5bo4D1(D:149-198)e5bo4D2(D:31-134)

Chain ETranscription elongation factor B polypeptide 2view chain

1 domain

e5bo4E1(E:2-98)

Chain FTranscription elongation factor B polypeptide 1view chain

1 domain

e5bo4F1(F:17-112)

Chain GSuppressor of cytokine signaling 2view chain

2 domains

e5bo4G1(G:149-198)e5bo4G2(G:31-134)

Chain HTranscription elongation factor B polypeptide 2view chain

1 domain

e5bo4H1(H:1-103)

Chain ITranscription elongation factor B polypeptide 1view chain

1 domain

e5bo4I1(I:16-112)

Chain JSuppressor of cytokine signaling 2view chain

2 domains

e5bo4J1(J:149-198)e5bo4J2(J:31-134)

Chain KTranscription elongation factor B polypeptide 2view chain

1 domain

e5bo4K1(K:2-103)

Chain LTranscription elongation factor B polypeptide 1view chain

1 domain

e5bo4L1(L:16-112)

Chain MSuppressor of cytokine signaling 2view chain

2 domains

e5bo4M1(M:32-134)e5bo4M2(M:149-198)

Chain NTranscription elongation factor B polypeptide 2view chain

1 domain

e5bo4N1(N:2-77,N:97-104)

Chain OTranscription elongation factor B polypeptide 1view chain

1 domain

e5bo4O1(O:17-112)

Chain PSuppressor of cytokine signaling 2view chain

2 domains

e5bo4P1(P:149-198)e5bo4P2(P:32-134)

Chain QTranscription elongation factor B polypeptide 2view chain

1 domain

e5bo4Q1(Q:2-103)

Chain RTranscription elongation factor B polypeptide 1view chain

1 domain

e5bo4R1(R:17-112)

All Domains (24)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5bo4A1	A:31-134	SH2	214 → 214.1 → 214.1.1
2	A	e5bo4A2	A:149-198	SOCS_box	4215 → 4215.1 → 4215.1.1
3	B	e5bo4B1	B:2-104	ubiquitin	221 → 221.1 → 221.1.1
4	C	e5bo4C1	C:16-112	Skp1_POZ	226 → 226.1 → 226.1.1
5	D	e5bo4D1	D:149-198	SOCS_box	4215 → 4215.1 → 4215.1.1
6	D	e5bo4D2	D:31-134	SH2	214 → 214.1 → 214.1.1
7	E	e5bo4E1	E:2-98	ubiquitin	221 → 221.1 → 221.1.1
8	F	e5bo4F1	F:17-112	Skp1_POZ	226 → 226.1 → 226.1.1
9	G	e5bo4G1	G:149-198	SOCS_box	4215 → 4215.1 → 4215.1.1
10	G	e5bo4G2	G:31-134	SH2	214 → 214.1 → 214.1.1
11	H	e5bo4H1	H:1-103	ubiquitin	221 → 221.1 → 221.1.1
12	I	e5bo4I1	I:16-112	Skp1_POZ	226 → 226.1 → 226.1.1
13	J	e5bo4J1	J:149-198	SOCS_box	4215 → 4215.1 → 4215.1.1
14	J	e5bo4J2	J:31-134	SH2	214 → 214.1 → 214.1.1
15	K	e5bo4K1	K:2-103	ubiquitin	221 → 221.1 → 221.1.1
16	L	e5bo4L1	L:16-112	Skp1_POZ	226 → 226.1 → 226.1.1
17	M	e5bo4M1	M:32-134	SH2	214 → 214.1 → 214.1.1
18	M	e5bo4M2	M:149-198	SOCS_box	4215 → 4215.1 → 4215.1.1
19	N	e5bo4N1	N:2-77,N:97-104	ubiquitin	221 → 221.1 → 221.1.1
20	O	e5bo4O1	O:17-112	Skp1_POZ	226 → 226.1 → 226.1.1
21	P	e5bo4P1	P:149-198	SOCS_box	4215 → 4215.1 → 4215.1.1
22	P	e5bo4P2	P:32-134	SH2	214 → 214.1 → 214.1.1
23	Q	e5bo4Q1	Q:2-103	ubiquitin	221 → 221.1 → 221.1.1
24	R	e5bo4R1	R:17-112	Skp1_POZ	226 → 226.1 → 226.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors