ECODEvolutionary Classification of Protein Domains

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PDB 5CCG

X-RAY DIFFRACTION3.50 Å11 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AVesicle-associated membrane protein 2view chain

1 domain

e5ccgA1(A:27-89)

Chain BSyntaxin-1Aview chain

1 domain

e5ccgB1(B:1-37)

Chain ESynaptotagmin-1view chain

2 domains

e5ccgE1(E:269-419)e5ccgE2(E:141-268)

Chain FSynaptotagmin-1view chain

2 domains

e5ccgF1(F:269-419)e5ccgF2(F:141-268)

Chain GVesicle-associated membrane protein 2view chain

1 domain

e5ccgG1(G:27-89)

Chain HSyntaxin-1Aview chain

1 domain

e5ccgH1(H:1-37)

Chain KSynaptotagmin-1view chain

2 domains

e5ccgK1(K:269-419)e5ccgK2(K:141-268)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5ccgA1	A:27-89	Synaptobrevin	3100 → 3100.1 → 3100.1.1
2	B	e5ccgB1	B:1-37	SNARE	603 → 603.1 → 603.1.1
3	E	e5ccgE1	E:269-419	C2	11 → 11.2 → 11.2.1
4	E	e5ccgE2	E:141-268	C2	11 → 11.2 → 11.2.1
5	F	e5ccgF1	F:269-419	C2	11 → 11.2 → 11.2.1
6	F	e5ccgF2	F:141-268	C2	11 → 11.2 → 11.2.1
7	G	e5ccgG1	G:27-89	Synaptobrevin	3100 → 3100.1 → 3100.1.1
8	H	e5ccgH1	H:1-37	SNARE	603 → 603.1 → 603.1.1
9	K	e5ccgK1	K:269-419	C2	11 → 11.2 → 11.2.1
10	K	e5ccgK2	K:141-268	C2	11 → 11.2 → 11.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors