ECODEvolutionary Classification of Protein Domains

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PDB 5CPK

X-RAY DIFFRACTION2.63 Å10 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHistone H3.1view chain

1 domain

e5cpkA1(A:38-134)

Chain BHistone H4view chain

1 domain

e5cpkB1(B:24-102)

Chain CHistone H2A type 1-B/Eview chain

1 domain

e5cpkC1(C:13-118)

Chain DHistone H2B type 1-Jview chain

1 domain

e5cpkD1(D:32-123)

Chain EHistone H3.1view chain

1 domain

e5cpkE1(E:38-135)

Chain FHistone H4view chain

1 domain

e5cpkF1(F:19-101)

Chain GHistone H2A type 1-B/Eview chain

1 domain

e5cpkG1(G:15-118)

Chain HHistone H2B type 1-Jview chain

1 domain

e5cpkH1(H:34-124)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5cpkA1	A:38-134	Histone	148 → 148.1 → 148.1.1
2	B	e5cpkB1	B:24-102	CENP-T_C	148 → 148.1 → 148.1.1
3	C	e5cpkC1	C:13-118	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
4	D	e5cpkD1	D:32-123	Histone	148 → 148.1 → 148.1.1
5	E	e5cpkE1	E:38-135	Histone	148 → 148.1 → 148.1.1
6	F	e5cpkF1	F:19-101	CENP-T_C	148 → 148.1 → 148.1.1
7	G	e5cpkG1	G:15-118	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
8	H	e5cpkH1	H:34-124	Histone	148 → 148.1 → 148.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors