ECODEvolutionary Classification of Protein Domains

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PDB 5D6C

X-RAY DIFFRACTION1.72 Å4 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain A4497 antibody IgK (VL and CL)view chain

2 domains

e5d6cA1(A:1-107)e5d6cA2(A:108-213)

Chain B4497 antibody IgG1 (VH and CH1)view chain

2 domains

e5d6cB1(B:1-112)e5d6cB2(B:113-212)

Chain H4497 antibody IgG1 (VH and CH1)view chain

2 domains

e5d6cH1(H:1-112)e5d6cH2(H:113-218)

Chain L4497 antibody IgK (VL and CL)view chain

2 domains

e5d6cL1(L:114-219)e5d6cL2(L:1-113)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5d6cA1	A:1-107	V-set	11 → 11.1 → 11.1.1
2	A	e5d6cA2	A:108-213	C1-set	11 → 11.1 → 11.1.1
3	B	e5d6cB1	B:1-112	V-set	11 → 11.1 → 11.1.1
4	B	e5d6cB2	B:113-212	C1-set	11 → 11.1 → 11.1.1
5	H	e5d6cH1	H:1-112	V-set	11 → 11.1 → 11.1.1
6	H	e5d6cH2	H:113-218	C1-set	11 → 11.1 → 11.1.1
7	L	e5d6cL1	L:114-219	C1-set	11 → 11.1 → 11.1.1
8	L	e5d6cL2	L:1-113	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors