ECODEvolutionary Classification of Protein Domains

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PDB 5D6W

X-RAY DIFFRACTION1.99 Å4 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ALysine-specific demethylase 4Aview chain

2 domains

e5d6wA1(A:897-955)e5d6wA2(A:956-1011)

Chain BLysine-specific demethylase 4Aview chain

2 domains

e5d6wB1(B:956-1011)e5d6wB2(B:897-955)

Chain CLysine-specific demethylase 4Aview chain

2 domains

e5d6wC1(C:956-1011)e5d6wC2(C:897-955)

Chain DLysine-specific demethylase 4Aview chain

2 domains

e5d6wD1(D:897-955)e5d6wD2(D:956-1011)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5d6wA1	A:897-955	Tudor_2	4 → 4.1 → 4.1.1
2	A	e5d6wA2	A:956-1011	Tudor_2	4 → 4.1 → 4.1.1
3	B	e5d6wB1	B:956-1011	Tudor_2	4 → 4.1 → 4.1.1
4	B	e5d6wB2	B:897-955	Tudor_2	4 → 4.1 → 4.1.1
5	C	e5d6wC1	C:956-1011	Tudor_2	4 → 4.1 → 4.1.1
6	C	e5d6wC2	C:897-955	Tudor_2	4 → 4.1 → 4.1.1
7	D	e5d6wD1	D:897-955	Tudor_2	4 → 4.1 → 4.1.1
8	D	e5d6wD2	D:956-1011	Tudor_2	4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors