ECODEvolutionary Classification of Protein Domains

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PDB 5F2V

X-RAY DIFFRACTION2.80 Å12 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain OGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vO1(O:3-197)

Chain PGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vP1(P:3-197)

Chain QGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vQ1(Q:4-197)

Chain RGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vR1(R:3-197)

Chain SGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vS1(S:3-197)

Chain TGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vT1(T:3-197)

Chain UGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vU1(U:3-197)

Chain VGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vV1(V:3-197)

Chain WGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vW1(W:3-197)

Chain XGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vX1(X:3-197)

Chain YGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vY1(Y:3-197)

Chain ZGTP pyrophosphokinase YjbMview chain

1 domain

e5f2vZ1(Z:2-194)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	O	e5f2vO1	O:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
2	P	e5f2vP1	P:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
3	Q	e5f2vQ1	Q:4-197	RelA_SpoT	316 → 316.1 → 316.1.1
4	R	e5f2vR1	R:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
5	S	e5f2vS1	S:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
6	T	e5f2vT1	T:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
7	U	e5f2vU1	U:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
8	V	e5f2vV1	V:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
9	W	e5f2vW1	W:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
10	X	e5f2vX1	X:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
11	Y	e5f2vY1	Y:3-197	RelA_SpoT	316 → 316.1 → 316.1.1
12	Z	e5f2vZ1	Z:2-194	RelA_SpoT	316 → 316.1 → 316.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors