ECODEvolutionary Classification of Protein Domains

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PDB 5HHD

X-RAY DIFFRACTION2.10 Å8 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AVascular endothelial growth factor Aview chain

1 domain

e5hhdA1(A:6-100)

Chain BVascular endothelial growth factor Aview chain

1 domain

e5hhdB1(B:6-100)

Chain CD-Peptide RFX037.Dview chain

1 domain

e5hhdC1(C:4-66)

Chain DD-Peptide RFX037.Dview chain

1 domain

e5hhdD1(D:4-66)

Chain ED-Vascular endothelial growth factorview chain

1 domain

e5hhdE1(E:7-100)

Chain FD-Vascular endothelial growth factorview chain

1 domain

e5hhdF1(F:7-100)

Chain GL-Peptide RFX037.Lview chain

1 domain

e5hhdG1(G:4-66)

Chain HL-Peptide RFX037.Lview chain

1 domain

e5hhdH1(H:4-68)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5hhdA1	A:6-100	PDGF	385 → 385.1 → 385.1.1
2	B	e5hhdB1	B:6-100	PDGF	385 → 385.1 → 385.1.1
3	C	e5hhdC1	C:4-66	IgG_binding_B	221 → 221.3 → 221.3.1
4	D	e5hhdD1	D:4-66	IgG_binding_B	221 → 221.3 → 221.3.1
5	E	e5hhdE1	E:7-100	PDGF	385 → 385.1 → 385.1.1
6	F	e5hhdF1	F:7-100	PDGF	385 → 385.1 → 385.1.1
7	G	e5hhdG1	G:4-66	IgG_binding_B	221 → 221.3 → 221.3.1
8	H	e5hhdH1	H:4-68	IgG_binding_B	221 → 221.3 → 221.3.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors