ECODEvolutionary Classification of Protein Domains

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PDB 5HNM

X-RAY DIFFRACTION2.30 Å6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AD-alanyl-D-alanine carboxypeptidaseview chain

1 domain

e5hnmA1(A:88-266)

Chain BD-alanyl-D-alanine carboxypeptidaseview chain

1 domain

e5hnmB1(B:88-268)

Chain CD-alanyl-D-alanine carboxypeptidaseview chain

1 domain

e5hnmC1(C:88-265)

Chain DD-alanyl-D-alanine carboxypeptidaseview chain

1 domain

e5hnmD1(D:88-266)

Chain ED-alanyl-D-alanine carboxypeptidaseview chain

1 domain

e5hnmE1(E:87-266)

Chain FD-alanyl-D-alanine carboxypeptidaseview chain

1 domain

e5hnmF1(F:87-266)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5hnmA1	A:88-266	VanY	307 → 307.1 → 307.1.1
2	B	e5hnmB1	B:88-268	VanY	307 → 307.1 → 307.1.1
3	C	e5hnmC1	C:88-265	VanY	307 → 307.1 → 307.1.1
4	D	e5hnmD1	D:88-266	VanY	307 → 307.1 → 307.1.1
5	E	e5hnmE1	E:87-266	VanY	307 → 307.1 → 307.1.1
6	F	e5hnmF1	F:87-266	VanY	307 → 307.1 → 307.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors