Home/PDB

PDB 5IM6

X-RAY DIFFRACTION5.58 Å40 chains40 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain aDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6a1(a:3-157)

Chain ADesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6A1(A:27-178)

Chain bDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6b1(b:3-157)

Chain BDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6B1(B:27-178)

Chain cDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6c1(c:3-157)

Chain CDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6C1(C:27-178)

Chain dDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6d1(d:3-157)

Chain DDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6D1(D:27-178)

Chain eDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6e1(e:3-157)

Chain EDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6E1(E:27-178)

Chain fDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6f1(f:3-157)

Chain FDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6F1(F:27-178)

Chain gDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6g1(g:3-157)

Chain GDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6G1(G:27-178)

Chain hDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6h1(h:3-157)

Chain HDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6H1(H:27-178)

Chain iDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6i1(i:3-157)

Chain IDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6I1(I:27-178)

Chain jDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6j1(j:3-157)

Chain JDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6J1(J:27-178)

Chain kDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6k1(k:3-157)

Chain KDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6K1(K:27-178)

Chain lDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6l1(l:3-157)

Chain LDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6L1(L:27-178)

Chain mDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6m1(m:3-157)

Chain MDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6M1(M:27-178)

Chain nDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6n1(n:3-157)

Chain NDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6N1(N:27-178)

Chain ODesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6O1(O:27-178)

Chain PDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6P1(P:27-178)

Chain QDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6Q1(Q:27-178)

Chain RDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6R1(R:27-178)

Chain SDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6S1(S:27-178)

Chain TDesigned self-assembling icosahedral cage I32-28 trimeric subunitview chain

1 domain

e5im6T1(T:27-178)

Chain UDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6U1(U:3-157)

Chain VDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6V1(V:3-157)

Chain WDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6W1(W:3-157)

Chain XDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6X1(X:3-157)

Chain YDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6Y1(Y:3-157)

Chain ZDesigned self-assembling icosahedral cage I32-28 dimeric subunitview chain

1 domain

e5im6Z1(Z:3-157)

All Domains (40)

#	Chain	Domain ID	Range	Family	Classification
1	a	e5im6a1	a:3-157	DUF3809	331 → 331.3 → 331.3.1
2	A	e5im6A1	A:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
3	b	e5im6b1	b:3-157	DUF3809	331 → 331.3 → 331.3.1
4	B	e5im6B1	B:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
5	c	e5im6c1	c:3-157	DUF3809	331 → 331.3 → 331.3.1
6	C	e5im6C1	C:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
7	d	e5im6d1	d:3-157	DUF3809	331 → 331.3 → 331.3.1
8	D	e5im6D1	D:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
9	e	e5im6e1	e:3-157	DUF3809	331 → 331.3 → 331.3.1
10	E	e5im6E1	E:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
11	f	e5im6f1	f:3-157	DUF3809	331 → 331.3 → 331.3.1
12	F	e5im6F1	F:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
13	g	e5im6g1	g:3-157	DUF3809	331 → 331.3 → 331.3.1
14	G	e5im6G1	G:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
15	h	e5im6h1	h:3-157	DUF3809	331 → 331.3 → 331.3.1
16	H	e5im6H1	H:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
17	i	e5im6i1	i:3-157	DUF3809	331 → 331.3 → 331.3.1
18	I	e5im6I1	I:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
19	j	e5im6j1	j:3-157	DUF3809	331 → 331.3 → 331.3.1
20	J	e5im6J1	J:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
21	k	e5im6k1	k:3-157	DUF3809	331 → 331.3 → 331.3.1
22	K	e5im6K1	K:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
23	l	e5im6l1	l:3-157	DUF3809	331 → 331.3 → 331.3.1
24	L	e5im6L1	L:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
25	m	e5im6m1	m:3-157	DUF3809	331 → 331.3 → 331.3.1
26	M	e5im6M1	M:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
27	n	e5im6n1	n:3-157	DUF3809	331 → 331.3 → 331.3.1
28	N	e5im6N1	N:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
29	O	e5im6O1	O:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
30	P	e5im6P1	P:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
31	Q	e5im6Q1	Q:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
32	R	e5im6R1	R:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
33	S	e5im6S1	S:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
34	T	e5im6T1	T:27-178	Cob_adeno_trans	150 → 150.2 → 150.2.1
35	U	e5im6U1	U:3-157	DUF3809	331 → 331.3 → 331.3.1
36	V	e5im6V1	V:3-157	DUF3809	331 → 331.3 → 331.3.1
37	W	e5im6W1	W:3-157	DUF3809	331 → 331.3 → 331.3.1
38	X	e5im6X1	X:3-157	DUF3809	331 → 331.3 → 331.3.1
39	Y	e5im6Y1	Y:3-157	DUF3809	331 → 331.3 → 331.3.1
40	Z	e5im6Z1	Z:3-157	DUF3809	331 → 331.3 → 331.3.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors