ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 5JDB

X-RAY DIFFRACTION1.90 Å6 chains6 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain AOuter capsid protein VP4view chain

1 domain

e5jdbA1(A:1-160)

Chain BOuter capsid protein VP4view chain

1 domain

e5jdbB1(B:1-160)

Chain COuter capsid protein VP4view chain

1 domain

e5jdbC1(C:1-160)

Chain DOuter capsid protein VP4view chain

1 domain

e5jdbD1(D:1-160)

Chain EOuter capsid protein VP4view chain

1 domain

e5jdbE1(E:1-160)

Chain FOuter capsid protein VP4view chain

1 domain

e5jdbF1(F:1-160)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5jdbA1	A:1-160	VP4_haemagglut	10 → 10.1 → 10.1.1
2	B	e5jdbB1	B:1-160	VP4_haemagglut	10 → 10.1 → 10.1.1
3	C	e5jdbC1	C:1-160	VP4_haemagglut	10 → 10.1 → 10.1.1
4	D	e5jdbD1	D:1-160	VP4_haemagglut	10 → 10.1 → 10.1.1
5	E	e5jdbE1	E:1-160	VP4_haemagglut	10 → 10.1 → 10.1.1
6	F	e5jdbF1	F:1-160	VP4_haemagglut	10 → 10.1 → 10.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors