ECODEvolutionary Classification of Protein Domains

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PDB 5JP3

X-RAY DIFFRACTION2.90 Å8 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AXanthomonas outer protein Dview chain

1 domain

e5jp3A1(A:320-515)

Chain BPolyubiquitin-Bview chain

1 domain

e5jp3B1(B:1-76)

Chain CXanthomonas outer protein Dview chain

1 domain

e5jp3C1(C:320-515)

Chain DPolyubiquitin-Bview chain

1 domain

e5jp3D1(D:1-76)

Chain EXanthomonas outer protein Dview chain

1 domain

e5jp3E1(E:323-515)

Chain FPolyubiquitin-Bview chain

1 domain

e5jp3F1(F:1-76)

Chain GXanthomonas outer protein Dview chain

1 domain

e5jp3G1(G:320-515)

Chain HPolyubiquitin-Bview chain

1 domain

e5jp3H1(H:1-76)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5jp3A1	A:320-515	Peptidase_C48	219 → 219.1 → 219.1.1
2	B	e5jp3B1	B:1-76	ubiquitin	221 → 221.1 → 221.1.1
3	C	e5jp3C1	C:320-515	Peptidase_C48	219 → 219.1 → 219.1.1
4	D	e5jp3D1	D:1-76	ubiquitin	221 → 221.1 → 221.1.1
5	E	e5jp3E1	E:323-515	Peptidase_C48	219 → 219.1 → 219.1.1
6	F	e5jp3F1	F:1-76	ubiquitin	221 → 221.1 → 221.1.1
7	G	e5jp3G1	G:320-515	Peptidase_C48	219 → 219.1 → 219.1.1
8	H	e5jp3H1	H:1-76	ubiquitin	221 → 221.1 → 221.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors