ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 5KEN

ELECTRON MICROSCOPY16 chains16 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain AEbola surface glycoprotein, GP1view chain

1 domain

e5kenA1(A:33-187,A:209-260)

Chain BEbola surface glycoprotein, GP2view chain

1 domain

e5kenB1(B:503-615)

Chain Cc4G7 variable Fab domain heavy chainview chain

1 domain

e5kenC1(C:1-112)

Chain Dc4G7 variable Fab domain light chainview chain

1 domain

e5kenD1(D:1-107)

Chain EEbola surface glycoprotein, GP1view chain

1 domain

e5kenE1(E:33-187,E:209-278,E:299-308)

Chain FEbola surface glycoprotein, GP2view chain

1 domain

e5kenF1(F:503-615)

Chain Gc4G7 variable Fab domain heavy chainview chain

1 domain

e5kenG1(G:1-112)

Chain Hc4G7 variable Fab domain light chainview chain

1 domain

e5kenH1(H:1-107)

Chain Ic13C6 variable Fab domain light chainview chain

1 domain

e5kenI1(I:1-107)

Chain Jc13C6 variable Fab domain heavy chainview chain

1 domain

e5kenJ1(J:1-112)

Chain KEbola surface glycoprotein, GP1view chain

1 domain

e5kenK1(K:33-187,K:209-278,K:299-308)

Chain MEbola surface glycoprotein, GP2view chain

1 domain

e5kenM1(M:503-615)

Chain Nc4G7 variable Fab domain heavy chainview chain

1 domain

e5kenN1(N:1-112)

Chain Oc4G7 variable Fab domain light chainview chain

1 domain

e5kenO1(O:1-107)

Chain Pc13C6 variable Fab domain light chainview chain

1 domain

e5kenP1(P:1-107)

Chain Qc13C6 variable Fab domain heavy chainview chain

1 domain

e5kenQ1(Q:1-112)

All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5kenA1	A:33-187,A:209-260	Filo_glycop	3401 → 3401.1 → 3401.1.1
2	B	e5kenB1	B:503-615	Ebola-like_HR1-HR2	3782 → 3782.1 → 3782.1.1
3	C	e5kenC1	C:1-112	V-set	11 → 11.1 → 11.1.1
4	D	e5kenD1	D:1-107	V-set	11 → 11.1 → 11.1.1
5	E	e5kenE1	E:33-187,E:209-278,E:299-308	Filo_glycop	3401 → 3401.1 → 3401.1.1
6	F	e5kenF1	F:503-615	Ebola-like_HR1-HR2	3782 → 3782.1 → 3782.1.1
7	G	e5kenG1	G:1-112	V-set	11 → 11.1 → 11.1.1
8	H	e5kenH1	H:1-107	V-set	11 → 11.1 → 11.1.1
9	I	e5kenI1	I:1-107	V-set	11 → 11.1 → 11.1.1
10	J	e5kenJ1	J:1-112	V-set	11 → 11.1 → 11.1.1
11	K	e5kenK1	K:33-187,K:209-278,K:299-308	Filo_glycop	3401 → 3401.1 → 3401.1.1
12	M	e5kenM1	M:503-615	Ebola-like_HR1-HR2	3782 → 3782.1 → 3782.1.1
13	N	e5kenN1	N:1-112	V-set	11 → 11.1 → 11.1.1
14	O	e5kenO1	O:1-107	V-set	11 → 11.1 → 11.1.1
15	P	e5kenP1	P:1-107	V-set	11 → 11.1 → 11.1.1
16	Q	e5kenQ1	Q:1-112	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors