ECODEvolutionary Classification of Protein Domains

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PDB 5KGF

ELECTRON MICROSCOPY14 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHistone H3.2view chain

1 domain

e5kgfA1(A:35-135)

Chain BHistone H4view chain

1 domain

e5kgfB1(B:19-102)

Chain CHistone H2A type 1view chain

1 domain

e5kgfC1(C:9-121)

Chain DHistone H2B type 1-C/E/F/G/Iview chain

1 domain

e5kgfD1(D:23-122)

Chain EHistone H3.2view chain

1 domain

e5kgfE1(E:36-135)

Chain FHistone H4view chain

1 domain

e5kgfF1(F:19-102)

Chain GHistone H2A type 1view chain

1 domain

e5kgfG1(G:9-121)

Chain HHistone H2B type 1-C/E/F/G/Iview chain

1 domain

e5kgfH1(H:26-122)

Chain MUbiquitinview chain

1 domain

e5kgfM1(M:1-76)

Chain OUbiquitinview chain

1 domain

e5kgfO1(O:1-76)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5kgfA1	A:35-135	Histone	148 → 148.1 → 148.1.1
2	B	e5kgfB1	B:19-102	CENP-T_C	148 → 148.1 → 148.1.1
3	C	e5kgfC1	C:9-121	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
4	D	e5kgfD1	D:23-122	Histone	148 → 148.1 → 148.1.1
5	E	e5kgfE1	E:36-135	Histone	148 → 148.1 → 148.1.1
6	F	e5kgfF1	F:19-102	CENP-T_C	148 → 148.1 → 148.1.1
7	G	e5kgfG1	G:9-121	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
8	H	e5kgfH1	H:26-122	Histone	148 → 148.1 → 148.1.1
9	M	e5kgfM1	M:1-76	ubiquitin	221 → 221.1 → 221.1.1
10	O	e5kgfO1	O:1-76	ubiquitin	221 → 221.1 → 221.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors