ECODEvolutionary Classification of Protein Domains

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PDB 5LDJ

X-RAY DIFFRACTION2.80 Å4 chains4 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ARNA 2',3'-cyclic phosphodiesteraseview chain

1 domain

e5ldjA1(A:2-176)

Chain BRNA 2',3'-cyclic phosphodiesteraseview chain

1 domain

e5ldjB1(B:2-176)

Chain CRNA 2',3'-cyclic phosphodiesteraseview chain

1 domain

e5ldjC1(C:2-176)

Chain DRNA 2',3'-cyclic phosphodiesteraseview chain

1 domain

e5ldjD1(D:2-176)

All Domains (4)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5ldjA1	A:2-176	2_5_RNA_ligase2	264 → 264.1 → 264.1.1
2	B	e5ldjB1	B:2-176	2_5_RNA_ligase2	264 → 264.1 → 264.1.1
3	C	e5ldjC1	C:2-176	2_5_RNA_ligase2	264 → 264.1 → 264.1.1
4	D	e5ldjD1	D:2-176	2_5_RNA_ligase2	264 → 264.1 → 264.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors