ECODEvolutionary Classification of Protein Domains

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PDB 5MKI

X-RAY DIFFRACTION2.05 Å14 chains14 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ALike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiA1(A:3-72)

Chain BLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiB1(B:3-72)

Chain CLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiC1(C:3-72)

Chain DLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiD1(D:3-72)

Chain ELike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiE1(E:3-72)

Chain FLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiF1(F:3-72)

Chain GLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiG1(G:3-72)

Chain HLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiH1(H:2-72)

Chain ILike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiI1(I:3-72)

Chain JLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiJ1(J:3-72)

Chain KLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiK1(K:3-72)

Chain LLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiL1(L:3-72)

Chain MLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiM1(M:3-72)

Chain NLike-Sm ribonucleoprotein coreview chain

1 domain

e5mkiN1(N:3-72)

All Domains (14)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5mkiA1	A:3-72	LSM	4 → 4.1 → 4.1.1
2	B	e5mkiB1	B:3-72	LSM	4 → 4.1 → 4.1.1
3	C	e5mkiC1	C:3-72	LSM	4 → 4.1 → 4.1.1
4	D	e5mkiD1	D:3-72	LSM	4 → 4.1 → 4.1.1
5	E	e5mkiE1	E:3-72	LSM	4 → 4.1 → 4.1.1
6	F	e5mkiF1	F:3-72	LSM	4 → 4.1 → 4.1.1
7	G	e5mkiG1	G:3-72	LSM	4 → 4.1 → 4.1.1
8	H	e5mkiH1	H:2-72	LSM	4 → 4.1 → 4.1.1
9	I	e5mkiI1	I:3-72	LSM	4 → 4.1 → 4.1.1
10	J	e5mkiJ1	J:3-72	LSM	4 → 4.1 → 4.1.1
11	K	e5mkiK1	K:3-72	LSM	4 → 4.1 → 4.1.1
12	L	e5mkiL1	L:3-72	LSM	4 → 4.1 → 4.1.1
13	M	e5mkiM1	M:3-72	LSM	4 → 4.1 → 4.1.1
14	N	e5mkiN1	N:3-72	LSM	4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors