ECODEvolutionary Classification of Protein Domains

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PDB 5N88

X-RAY DIFFRACTION1.70 Å4 chains4 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AVH59 antibodyview chain

1 domain

e5n88A1(A:1-126)

Chain DPC4 and SFRS1-interacting proteinview chain

1 domain

e5n88D1(D:347-425)

Chain EPC4 and SFRS1-interacting proteinview chain

1 domain

e5n88E1(E:345-424)

Chain HVH59 antibodyview chain

1 domain

e5n88H1(H:1-126)

All Domains (4)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5n88A1	A:1-126	V-set	11 → 11.1 → 11.1.1
2	D	e5n88D1	D:347-425	LEDGF	611 → 611.3 → 611.3.1
3	E	e5n88E1	E:345-424	LEDGF	611 → 611.3 → 611.3.1
4	H	e5n88H1	H:1-126	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors