ECODEvolutionary Classification of Protein Domains

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PDB 5NEU

ELECTRON MICROSCOPY6 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1O1 Manisa VP1view chain

1 domain

e5neu11(1:1-208)

Chain 2O1 Manisa VP2view chain

1 domain

e5neu21(2:12-218)

Chain 3Capsid proteinview chain

1 domain

e5neu31(3:1-220)

Chain AIntegrin alpha-Vview chain

2 domains

e5neuA1(A:439-594)e5neuA2(A:1-439)

Chain BIntegrin beta-6view chain

2 domains

e5neuB1(B:51-539)e5neuB2(B:5-55)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	1	e5neu11	1:1-208	Rhv	10 → 10.2 → 10.2.1
2	2	e5neu21	2:12-218	Rhv	10 → 10.2 → 10.2.1
3	3	e5neu31	3:1-220	Rhv	10 → 10.2 → 10.2.1
4	A	e5neuA1	A:439-594	Integrin_A_Ig_1	11 → 11.1 → 11.1.1
5	A	e5neuA2	A:1-439	FG-GAP	5 → 5.1 → 5.1.4
6	B	e5neuB1	B:51-539	2006.1.6.0	2006 → 2006.1 → 2006.1.6
7	B	e5neuB2	B:5-55	PSI_integrin	355 → 355.1 → 355.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors