ECODEvolutionary Classification of Protein Domains

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PDB 5NMG

X-RAY DIFFRACTION2.72 Å10 chains14 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHLA class I histocompatibility antigen, A-2 alpha chainview chain

2 domains

e5nmgA1(A:1-181)e5nmgA2(A:182-276)

Chain BBeta-2-microglobulinview chain

1 domain

e5nmgB1(B:0-99)

Chain DHuman T-cell receptor alpha chainview chain

2 domains

e5nmgD1(D:2-109)e5nmgD2(D:110-201)

Chain EHuman T-cell Receptor beta chainview chain

2 domains

e5nmgE1(E:1-116)e5nmgE2(E:117-242)

Chain FHLA class I histocompatibility antigen, A-2 alpha chainview chain

2 domains

e5nmgF1(F:182-276)e5nmgF2(F:1-181)

Chain GBeta-2-microglobulinview chain

1 domain

e5nmgG1(G:0-99)

Chain IHuman T-cell receptor alpha chainview chain

2 domains

e5nmgI1(I:2-109)e5nmgI2(I:110-201)

Chain JHuman T-cell Receptor beta chainview chain

2 domains

e5nmgJ1(J:2-116)e5nmgJ2(J:117-242)

All Domains (14)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5nmgA1	A:1-181	MHC_I	233 → 233.1 → 233.1.1
2	A	e5nmgA2	A:182-276	C1-set	11 → 11.1 → 11.1.1
3	B	e5nmgB1	B:0-99	C1-set	11 → 11.1 → 11.1.1
4	D	e5nmgD1	D:2-109	V-set	11 → 11.1 → 11.1.1
5	D	e5nmgD2	D:110-201	DUF1968	11 → 11.1 → 11.1.1
6	E	e5nmgE1	E:1-116	V-set	11 → 11.1 → 11.1.1
7	E	e5nmgE2	E:117-242	C1-set	11 → 11.1 → 11.1.1
8	F	e5nmgF1	F:182-276	C1-set	11 → 11.1 → 11.1.1
9	F	e5nmgF2	F:1-181	MHC_I	233 → 233.1 → 233.1.1
10	G	e5nmgG1	G:0-99	C1-set	11 → 11.1 → 11.1.1
11	I	e5nmgI1	I:2-109	V-set	11 → 11.1 → 11.1.1
12	I	e5nmgI2	I:110-201	DUF1968	11 → 11.1 → 11.1.1
13	J	e5nmgJ1	J:2-116	V-set	11 → 11.1 → 11.1.1
14	J	e5nmgJ2	J:117-242	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors