ECODEvolutionary Classification of Protein Domains

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PDB 5TVP

X-RAY DIFFRACTION2.40 Å17 chains9 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ATyrosyl-DNA phosphodiesterase 2view chain

1 domain

e5tvpA1(A:121-369)

Chain BTyrosyl-DNA phosphodiesterase 2view chain

1 domain

e5tvpB1(B:117-370)

Chain ETyrosyl-DNA phosphodiesterase 2view chain

1 domain

e5tvpE1(E:121-370)

Chain GTyrosyl-DNA phosphodiesterase 2view chain

1 domain

e5tvpG1(G:121-369)

Chain ITyrosyl-DNA phosphodiesterase 2view chain

1 domain

e5tvpI1(I:121-369)

Chain KTyrosyl-DNA phosphodiesterase 2view chain

1 domain

e5tvpK1(K:121-369)

Chain MTyrosyl-DNA phosphodiesterase 2view chain

1 domain

e5tvpM1(M:121-370)

Chain OTyrosyl-DNA phosphodiesterase 2view chain

1 domain

e5tvpO1(O:121-369)

Chain QSmall ubiquitin-related modifier 2view chain

1 domain

e5tvpQ1(Q:13-88)

All Domains (9)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5tvpA1	A:121-369	Exo_endo_phos	246 → 246.3 → 246.3.1
2	B	e5tvpB1	B:117-370	Exo_endo_phos	246 → 246.3 → 246.3.1
3	E	e5tvpE1	E:121-370	Exo_endo_phos	246 → 246.3 → 246.3.1
4	G	e5tvpG1	G:121-369	Exo_endo_phos	246 → 246.3 → 246.3.1
5	I	e5tvpI1	I:121-369	Exo_endo_phos	246 → 246.3 → 246.3.1
6	K	e5tvpK1	K:121-369	Exo_endo_phos	246 → 246.3 → 246.3.1
7	M	e5tvpM1	M:121-370	Exo_endo_phos	246 → 246.3 → 246.3.1
8	O	e5tvpO1	O:121-369	Exo_endo_phos	246 → 246.3 → 246.3.1
9	Q	e5tvpQ1	Q:13-88	Rad60-SLD	221 → 221.1 → 221.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors