ECODEvolutionary Classification of Protein Domains

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PDB 5WAU

X-RAY DIFFRACTION1.95 Å26 chains28 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aCytochrome c oxidase subunit 1view chain

1 domain

e5waua1(a:1-514)

Chain ACytochrome c oxidase subunit 1view chain

1 domain

e5wauA1(A:1-514)

Chain bCytochrome c oxidase subunit 2view chain

2 domains

e5waub1(b:91-227)e5waub2(b:1-90)

Chain BCytochrome c oxidase subunit 2view chain

2 domains

e5wauB1(B:2-90)e5wauB2(B:91-227)

Chain cCytochrome c oxidase subunit 3view chain

1 domain

e5wauc1(c:3-261)

Chain CCytochrome c oxidase subunit 3view chain

1 domain

e5wauC1(C:3-261)

Chain dCytochrome c oxidase subunit 4 isoform 1, mitochondrialview chain

1 domain

e5waud1(d:4-147)

Chain DCytochrome c oxidase subunit 4 isoform 1, mitochondrialview chain

1 domain

e5wauD1(D:4-147)

Chain eCytochrome c oxidase subunit 5A, mitochondrialview chain

1 domain

e5waue1(e:5-109)

Chain ECytochrome c oxidase subunit 5A, mitochondrialview chain

1 domain

e5wauE1(E:5-109)

Chain fCytochrome c oxidase subunit 5B, mitochondrialview chain

1 domain

e5wauf1(f:1-98)

Chain FCytochrome c oxidase subunit 5B, mitochondrialview chain

1 domain

e5wauF1(F:1-98)

Chain gCytochrome c oxidase subunit 6A2, mitochondrialview chain

1 domain

e5waug1(g:1-84)

Chain GCytochrome c oxidase subunit 6A2, mitochondrialview chain

1 domain

e5wauG1(G:1-84)

Chain hCytochrome c oxidase subunit 6B1view chain

1 domain

e5wauh1(h:7-85)

Chain HCytochrome c oxidase subunit 6B1view chain

1 domain

e5wauH1(H:7-85)

Chain iCytochrome c oxidase subunit 6Cview chain

1 domain

e5waui1(i:2-73)

Chain ICytochrome c oxidase subunit 6Cview chain

1 domain

e5wauI1(I:2-73)

Chain jCytochrome c oxidase subunit 7A1, mitochondrialview chain

1 domain

e5wauj1(j:1-58)

Chain JCytochrome c oxidase subunit 7A1, mitochondrialview chain

1 domain

e5wauJ1(J:1-58)

Chain kCytochrome c oxidase subunit 7B, mitochondrialview chain

1 domain

e5wauk1(k:6-54)

Chain KCytochrome c oxidase subunit 7B, mitochondrialview chain

1 domain

e5wauK1(K:6-54)

Chain lCytochrome c oxidase subunit 7C, mitochondrialview chain

1 domain

e5waul1(l:2-47)

Chain LCytochrome c oxidase subunit 7C, mitochondrialview chain

1 domain

e5wauL1(L:2-47)

Chain mCytochrome c oxidase subunit 8B, mitochondrialview chain

1 domain

e5waum1(m:1-43)

Chain MCytochrome c oxidase subunit 8B, mitochondrialview chain

1 domain

e5wauM1(M:1-43)

All Domains (28)

#	Chain	Domain ID	Range	Family	Classification
1	a	e5waua1	a:1-514	COX1	5038 → 5038.1 → 5038.1.1
2	A	e5wauA1	A:1-514	COX1	5038 → 5038.1 → 5038.1.1
3	b	e5waub1	b:91-227	COX2	3156 → 3156.1 → 3156.1.1
4	b	e5waub2	b:1-90	COX2_TM	5040 → 5040.1 → 5040.1.1
5	B	e5wauB1	B:2-90	COX2_TM	5040 → 5040.1 → 5040.1.1
6	B	e5wauB2	B:91-227	COX2	3156 → 3156.1 → 3156.1.1
7	c	e5wauc1	c:3-261	COX3	5039 → 5039.1 → 5039.1.1
8	C	e5wauC1	C:3-261	COX3	5039 → 5039.1 → 5039.1.1
9	d	e5waud1	d:4-147	COX4	5003 → 5003.1 → 5003.1.1
10	D	e5wauD1	D:4-147	COX4	5003 → 5003.1 → 5003.1.1
11	e	e5waue1	e:5-109	COX5A	109 → 109.7 → 109.7.1
12	E	e5wauE1	E:5-109	COX5A	109 → 109.7 → 109.7.1
13	f	e5wauf1	f:1-98	COX5B	375 → 375.1 → 375.1.8
14	F	e5wauF1	F:1-98	COX5B	375 → 375.1 → 375.1.8
15	g	e5waug1	g:1-84	COX6A	5004 → 5004.1 → 5004.1.1
16	G	e5wauG1	G:1-84	COX6A	5004 → 5004.1 → 5004.1.1
17	h	e5wauh1	h:7-85	COX6B	540 → 540.1 → 540.1.1
18	H	e5wauH1	H:7-85	COX6B	540 → 540.1 → 540.1.1
19	i	e5waui1	i:2-73	COX6C	5005 → 5005.1 → 5005.1.1
20	I	e5wauI1	I:2-73	COX6C	5005 → 5005.1 → 5005.1.1
21	j	e5wauj1	j:1-58	COX7a	5006 → 5006.1 → 5006.1.1
22	J	e5wauJ1	J:1-58	COX7a	5006 → 5006.1 → 5006.1.1
23	k	e5wauk1	k:6-54	COX7B	5007 → 5007.1 → 5007.1.1
24	K	e5wauK1	K:6-54	COX7B	5007 → 5007.1 → 5007.1.1
25	l	e5waul1	l:2-47	COX7C	5008 → 5008.1 → 5008.1.1
26	L	e5wauL1	L:2-47	COX7C	5008 → 5008.1 → 5008.1.1
27	m	e5waum1	m:1-43	COX8	5009 → 5009.1 → 5009.1.1
28	M	e5wauM1	M:1-43	COX8	5009 → 5009.1 → 5009.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors