ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 5XJL

X-RAY DIFFRACTION2.50 Å7 chains6 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain 2Gem-associated protein 2view chain

1 domain

e5xjl21(2:22-149,2:179-278)

Chain ASmall nuclear ribonucleoprotein Sm D1view chain

1 domain

e5xjlA1(A:1-81)

Chain BSmall nuclear ribonucleoprotein Sm D2view chain

1 domain

e5xjlB1(B:22-117)

Chain ESmall nuclear ribonucleoprotein Eview chain

1 domain

e5xjlE1(E:14-90)

Chain FSmall nuclear ribonucleoprotein Fview chain

1 domain

e5xjlF1(F:3-76)

Chain GSmall nuclear ribonucleoprotein Gview chain

1 domain

e5xjlG1(G:8-72)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	2	e5xjl21	2:22-149,2:179-278	SIP1	109 → 109.22 → 109.22.1
2	A	e5xjlA1	A:1-81	LSM	4 → 4.1 → 4.1.1
3	B	e5xjlB1	B:22-117	LSM	4 → 4.1 → 4.1.1
4	E	e5xjlE1	E:14-90	LSM	4 → 4.1 → 4.1.1
5	F	e5xjlF1	F:3-76	LSM	4 → 4.1 → 4.1.1
6	G	e5xjlG1	G:8-72	LSM	4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors