ECODEvolutionary Classification of Protein Domains

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PDB 5XJS

X-RAY DIFFRACTION3.37 Å6 chains5 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 2Gem-associated protein 2view chain

1 domain

e5xjs21(2:42-149,2:179-279)

Chain ASmall nuclear ribonucleoprotein Sm D1view chain

1 domain

e5xjsA1(A:2-81)

Chain BSmall nuclear ribonucleoprotein Sm D2view chain

1 domain

e5xjsB1(B:13-117)

Chain ESmall nuclear ribonucleoprotein Eview chain

1 domain

e5xjsE1(E:16-90)

Chain FSmall nuclear ribonucleoprotein Fview chain

1 domain

e5xjsF1(F:3-76)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	2	e5xjs21	2:42-149,2:179-279	SIP1	109 → 109.22 → 109.22.1
2	A	e5xjsA1	A:2-81	LSM	4 → 4.1 → 4.1.1
3	B	e5xjsB1	B:13-117	LSM	4 → 4.1 → 4.1.1
4	E	e5xjsE1	E:16-90	LSM	4 → 4.1 → 4.1.1
5	F	e5xjsF1	F:3-76	LSM	4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors